RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR5I1Q13606 314 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 CRMP1Q14194 572 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 SAXO2Q658L1 398 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 RPL7L1Q6DKI1 246 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 HEPHL1Q6MZM0 1159 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 ESPNLQ6ZVH7 1005 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 YIPF5Q969M3 257 aa12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-201ENST00000372189 CCSO14618 274 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 ECI1P42126 302 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 H1FNTQ75WM6 255 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 OLIG1Q8TAK6 271 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLCO4A1Q96BD0 722 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 GABRG3Q99928 467 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM43Q9BTV4 400 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 CDCA4Q9BXL8 241 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 MRPS28Q9Y2Q9 187 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 M0R1X1 148 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR2C1O95371 312 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SRP9P49458 86 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR2AE1Q8NHA4 323 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 CHST8Q9H2A9 424 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SMPD2O60906 423 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SIX6O95475 246 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 LY86O95711 162 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 FZD2Q14332 565 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 CYHR1Q6ZMK1 362 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF600Q6ZNG1 722 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SARAFQ96BY9 339 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 GPR78Q96P69 363 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR4C45A6NMZ5 311 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 ADGRE4PQ86SQ3 457 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 RDH10Q8IZV5 341 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC22A24Q8N4F4 322 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 IL1F10Q8WWZ1 152 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR14J1Q9UGF5 321 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 KPTNQ9Y664 436 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 PPICP45877 212 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 TSSK2Q96PF2 358 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 NMNAT3Q96T66 252 aa12.12□□□□□ -0.47
RAPGEF1-201ENST00000372189 SCN4AP35499 1836 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 BMPR1BO00238 502 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 ABHD16AO95870 558 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF266Q14584 549 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TEX30Q5JUR7 227 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 MCHR2Q969V1 340 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 DAZAP1Q96EP5 407 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TRIB1Q96RU8 372 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 M0QYG6 137 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC25A17O43808 307 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMPRSS11DO60235 418 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 IL2RAP01589 272 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 Q6ZTK2 550 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 NKAIN3Q8N8D7 197 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 NT5CQ8TCD5 201 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 RAD52P43351 418 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 OR2B8PP59922 312 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 GABRG1Q8N1C3 465 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 ANKRD9Q96BM1 317 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 OOEPA6NGQ2 149 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 RAF1P04049 648 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 NQO2P16083 231 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 PTAFRP25105 342 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 KCNRGQ8N5I3 272 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 MMP11P24347 488 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 THBS3P49746 956 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 PKIAP61925 76 aa12.11□□□□□ -0.47
RAPGEF1-201ENST00000372189 SYT14P1Q58G82 188 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms