RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ASB17Q8WXJ9 295 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM106AQ96A25 262 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 RASD2Q96D21 266 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 C4orf45Q96LM5 186 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF587Q96SQ5 575 aaPredicted RBP10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 TSNAXQ99598 290 aaKnown RBP10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 VRK1Q99986 396 aaPredicted RBP10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 MBD2Q9UBB5 411 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 C19orf25Q9UFG5 118 aaPredicted RBP10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 LAMP5Q9UJQ1 280 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 CLDN16Q9Y5I7 305 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 DMXL2Q8TDJ6 3036 aa10.23□□□□□ -0.77
TSPAN1-201ENST00000372003 IGKV3D-11A0A0A0MRZ8 115 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 BLACEA4D250 179 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 F8VVB4 439 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 F8VWA3 439 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 RPP14O95059 124 aaKnown RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 IL2RAP01589 272 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 APOC1P02654 83 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 CT62P0C5K7 136 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 FSTP19883 344 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ACHEP22303 614 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ADH7P40394 386 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 RFC3P40938 356 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 RAB13P51153 203 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 CHAF1BQ13112 559 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 EXOSC7Q15024 291 aaKnown RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 PNLIPRP3Q17RR3 467 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 HAGHLQ6PII5 290 aaPredicted RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SKA3Q8IX90 412 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF614Q8N883 585 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 OR1M1Q8NGA1 313 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 OR52R1Q8NGF1 315 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZPLD1Q8TCW7 415 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SEH1LQ96EE3 360 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 PRRT1Q99946 306 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM185BQ9H7F4 350 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF160Q9HCG1 818 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM100Q9NV29 134 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ERVK-19Q9WJR5 959 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 APC2O95996 2303 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SEC16AO15027 2179 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 URB1O60287 2271 aaKnown RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 IGF2RP11717 2491 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 CHD8Q9HCK8 2581 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 FER1L5A0AVI2 2057 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 IGHV1-45A0A0A0MS14 117 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 NSG1A0A0A6YYJ2 146 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SERINC4A6NH21 518 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 OR10H2O60403 315 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SNAPINO95295 136 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 RENP00797 406 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF735P0CB33 412 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 COX6A1P12074 109 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 TACR3P29371 465 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 MAGEB1P43366 347 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 LUMP51884 338 aaPredicted RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SERTAD2Q14140 314 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF74Q16587 644 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ATPAF1Q5TC12 328 aaPredicted RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 WBP2NLQ6ICG8 309 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 PAPD4Q6PIY7 484 aaKnown RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 SLC25A42Q86VD7 318 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 LURAP1LQ8IV03 231 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 DMBX1Q8NFW5 382 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZBTB8AQ96BR9 441 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 IP6K3Q96PC2 410 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 DGAT2Q96PD7 388 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF471Q9BX82 626 aaPredicted RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF629Q9UEG4 869 aaPredicted RBP10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 KLHDC2Q9Y2U9 406 aa10.22□□□□□ -0.77
TSPAN1-201ENST00000372003 LOC102723996A0A087X1L8 192 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 CSTAP01040 98 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 CYC1P08574 325 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ASAH2BP0C7U1 165 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 CD79AP11912 226 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 RAB6AP20340 208 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 PVALBP20472 110 aaPredicted RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 S1PR1P21453 382 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 NR0B1P51843 470 aaKnown RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 PGDP52209 483 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 UBE2MP61081 183 aaKnown RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 GUCA2AQ02747 115 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 DHRS2Q13268 280 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 MELKQ14680 651 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 PCOLCEQ15113 449 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 INPP5JQ15735 1006 aaPredicted RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 STK11Q15831 433 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ALG10Q5BKT4 473 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 EEF1A1P5Q5VTE0 462 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ELP2Q6IA86 826 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 IL34Q6ZMJ4 242 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 DGAT2L6Q6ZPD8 337 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms