RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TAS2R4Q9NYW5 299 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 ABHD16AO95870 558 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 CD3DP04234 171 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 IAPPP10997 89 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
COL5A1-201ENST00000371817 LEMD1Q68G75 181 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM255BQ8WV15 326 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 SHDQ96IW2 340 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 RSG1Q9BU20 258 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 GPR61Q9BZJ8 451 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 CDRT15L2A8MXV6 281 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 OR8B8Q15620 311 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 SSX1Q16384 188 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 DEFB118Q96PH6 123 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
COL5A1-201ENST00000371817 B4DEV8 164 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 DNPH1O43598 174 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 COX7A2P2O60397 106 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 HTR1DP28221 377 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 FAM209AQ5JX71 171 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 LINC00346Q8IVM7 164 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM251Q8N6I4 163 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 CHST14Q8NCH0 376 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 SMIM4Q8WVI0 70 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 RARRES3Q9UL19 164 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.17
COL5A1-201ENST00000371817 DCXRQ7Z4W1 244 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
COL5A1-201ENST00000371817 OR5M1Q8NGP8 315 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 GPR137Q96N19 417 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 C20orf27Q9GZN8 174 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 FABP2P12104 132 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 GGTA1PQ4G0N0 100 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 GJC3Q8NFK1 279 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 OR2T10Q8NGZ9 312 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 GPX7Q96SL4 187 aaPredicted RBP13.96□□□□□ -0.18
COL5A1-201ENST00000371817 TMEM184BQ9Y519 407 aaPredicted RBP13.96□□□□□ -0.18
COL5A1-201ENST00000371817 NEURL1O76050 574 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 PTGER1P34995 402 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 MARCH1Q8TCQ1 289 aa13.96□□□□□ -0.18
COL5A1-201ENST00000371817 DCTDP32321 178 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 OR3A1P47881 315 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 FABP5Q01469 135 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 GABARAPL3Q9BY60 117 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 KIR2DS3Q14952 304 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 SLC26A10Q8NG04 563 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 MYO7BQ6PIF6 2116 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 PYCARD-AS1I3L0S3 204 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 PLRG1O43660 514 aaKnown RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 GALR3O60755 368 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 NRASP01111 189 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 HRASP01112 189 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 KRASP01116 189 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 RAB38P57729 211 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 GPNMBQ14956 572 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 GABRA6Q16445 453 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 KIAA2026Q5HYC2 2103 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 OR2B11Q5JQS5 317 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 SULT1A1P50225 295 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 DHODHQ02127 395 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 HMSDA8MTL9 139 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 DUS4LO95620 317 aaKnown RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 NOGQ13253 232 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 DPPA3Q6W0C5 159 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 GDF7Q7Z4P5 450 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 MAML2Q8IZL2 1156 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 S1PR3Q99500 378 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 KCNK15Q9H427 330 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 PPP6CO00743 305 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 SHHQ15465 462 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 VN1R17PQ8TDU5 208 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 LPAR3Q9UBY5 353 aa13.95□□□□□ -0.18
COL5A1-201ENST00000371817 APOBEC3BQ9UH17 382 aaKnown RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 SPTBN1Q01082 2364 aaKnown RBP13.95□□□□□ -0.18
COL5A1-201ENST00000371817 RNGTTO60942 597 aaKnown RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 MRPL33O75394 65 aaKnown RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 IRS1P35568 1242 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 DCAF7P61962 342 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SRSF9Q13242 221 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ARL6IP6Q8N6S5 226 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 CNEP1R1Q8N9A8 125 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 FAM131CQ96AQ9 280 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 LINC00052Q96N35 136 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 ARHGAP9Q9BRR9 750 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 Q9N2K0 584 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 CSF2RAP15509 400 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 SDHBP21912 280 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 TSEN54Q7Z6J9 526 aaKnown RBP13.94□□□□□ -0.18
COL5A1-201ENST00000371817 OR4S1Q8NGB4 309 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 OR51F2Q8NH61 342 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
COL5A1-201ENST00000371817 CARFQ8N187 725 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms