RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HCCSP53701 268 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CXCR4P61073 352 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 IL5RAQ01344 420 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 TMED1Q13445 227 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 HLXQ14774 488 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CLEC2AQ6UVW9 174 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PRSS57Q6UWY2 283 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 MRPL21Q7Z2W9 205 aaKnown RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 KRTAP1-3Q8IUG1 177 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ZCCHC24Q8N2G6 241 aaKnown RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 OR10H4Q8NGA5 316 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CMBLQ96DG6 245 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 Q96MF0 132 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 TBX5Q99593 518 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 LRP12Q9Y561 859 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PSMD9O00233 223 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 RAC2P15153 192 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF121P58317 390 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PSG7Q13046 419 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CARTPTQ16568 116 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 OCLNQ16625 522 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CLEC12BQ2HXU8 276 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SNAI3Q3KNW1 292 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SLC25A30Q5SVS4 291 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 TTC23Q5W5X9 447 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 DHRSXQ8N5I4 330 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 NEU4Q8WWR8 484 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 GTF3AQ92664 365 aaKnown RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 RNFT2Q96EX2 444 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 Q96MT0 163 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 ADI1Q9BV57 179 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 MROQ9BYG7 248 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 VCX3BQ9H321 246 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 NIPAL2Q9H841 368 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 SP140LQ9H930 580 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 BRD7Q9NPI1 651 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
COL9A1-204ENST00000370496 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
COL9A1-204ENST00000370496 C17orf100A8MU93 164 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 TPD52L2O43399 206 aaKnown RBP12.68□□□□□ -0.38
COL9A1-204ENST00000370496 XRCC2O43543 280 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 LY6HO94772 140 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 CLIC3O95833 236 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 CSF3P09919 207 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 LIPAP38571 399 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF81P51508 661 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 PRSS12P56730 875 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 TIGD6Q17RP2 521 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 GFOD2Q3B7J2 385 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 TMEM255AQ5JRV8 349 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 GLYATL3Q5SZD4 288 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF691Q5VV52 312 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF322Q6U7Q0 402 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-204ENST00000370496 FBXW12Q6X9E4 464 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 FAM57BQ71RH2 274 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 OR5AS1Q8N127 324 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF525Q8N782 197 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 BHLHE23Q8NDY6 225 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 OR2AE1Q8NHA4 323 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 OR8B4Q96RC9 309 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 AASSQ9UDR5 926 aa12.68□□□□□ -0.38
COL9A1-204ENST00000370496 ZSCAN5BA6NJL1 495 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-204ENST00000370496 SELEP16581 610 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 GABRB1P18505 474 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 KITLGP21583 273 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 CAPGP40121 348 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 MMP15P51511 669 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
COL9A1-204ENST00000370496 ACTC1P68032 377 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 ACTA1P68133 377 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 GK2Q14410 553 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-204ENST00000370496 PCGF3Q3KNV8 242 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 OR2T2Q6IF00 324 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 USP51Q70EK9 711 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 TGIF2LYQ8IUE0 185 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 ZNF679Q8IYX0 411 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 OR52H1Q8NGJ2 320 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 RHOXF1Q8NHV9 184 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 OR10A2Q9H208 303 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
COL9A1-204ENST00000370496 MYOZ1Q9NP98 299 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-204ENST00000370496 TRIM64A6NGJ6 449 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms