RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZNF433Q8N7K0 673 aaPredicted RBP20.83■□□□□ 0.92
SNX3-203ENST00000368979 CPEB3Q8NE35 698 aaKnown RBP20.83■□□□□ 0.92
SNX3-203ENST00000368979 SFXN3Q9BWM7 321 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 OPN3Q9H1Y3 402 aaPredicted RBP20.83■□□□□ 0.92
SNX3-203ENST00000368979 TINAGQ9UJW2 476 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 DHDHQ9UQ10 334 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 A0A1B0GTI1 187 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 NCR1O76036 304 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 COX5BP10606 129 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 CD79AP11912 226 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 SRMP19623 302 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 SLC6A9P48067 706 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 HGFACQ04756 655 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 LY6DQ14210 128 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 GABRA6Q16445 453 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 TMEM53Q6P2H8 277 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 PCSK4Q6UW60 755 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 ZNF610Q8N9Z0 462 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 OR6Q1Q8NGQ2 317 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 NANOS1Q8WY41 292 aaKnown RBP20.82■□□□□ 0.92
SNX3-203ENST00000368979 KCNS3Q9BQ31 491 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 B3GNT2Q9NY97 397 aa20.82■□□□□ 0.92
SNX3-203ENST00000368979 A0A0G2JK05 382 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 IQCMA0A1B0GVH7 501 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 E9PLN8 166 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 RAD51DO75771 328 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 LYZL6O75951 148 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 IGLV3-1P01715 115 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 CCL1P22362 96 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 PAX7P23759 505 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 RAB1AP62820 205 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 C1orf162Q8NEQ5 155 aaPredicted RBP20.81■□□□□ 0.92
SNX3-203ENST00000368979 OR51E1Q8TCB6 317 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 PGAM5Q96HS1 289 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 N6AMT1Q9Y5N5 214 aa20.81■□□□□ 0.92
SNX3-203ENST00000368979 C5orf63A6NC05 138 aa20.8■□□□□ 0.92
SNX3-203ENST00000368979 RAB3BP20337 219 aa20.8■□□□□ 0.92
SNX3-203ENST00000368979 CCDC36Q8IYA8 594 aa20.8■□□□□ 0.92
SNX3-203ENST00000368979 OR13C3Q8NGS6 347 aa20.8■□□□□ 0.92
SNX3-203ENST00000368979 C6orf62Q9GZU0 229 aaPredicted RBP20.8■□□□□ 0.92
SNX3-203ENST00000368979 PIEZO2Q9H5I5 2752 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 A0A0U1RQV5 110 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 A0A1B0GVI7 797 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 SYT7O43581 403 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 OR10A3P58181 314 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 GSG1Q2KHT4 349 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 CEP78Q5JTW2 689 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 BEND4Q6ZU67 534 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 SMURF1Q9HCE7 757 aa20.79■□□□□ 0.92
SNX3-203ENST00000368979 TRAV8-7A0A075B6U6 113 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 CIB4A0PJX0 185 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 CD2P06729 351 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 INHBBP09529 407 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 HOXB1P14653 301 aaPredicted RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 CFL1P23528 166 aaKnown RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 BMXP51813 675 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 P2RY6Q15077 328 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 MOGQ16653 247 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 ASPHD2Q6ICH7 369 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 STAC2Q6ZMT1 411 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 LUZP2Q86TE4 346 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 ZNF75AQ96N20 296 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 ZCCHC4Q9H5U6 513 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 TCF7L1Q9HCS4 588 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 GPR84Q9NQS5 396 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 ZNF275Q9NSD4 429 aaPredicted RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 SVILO95425 2214 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 LOC100509620A0A075B734 347 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 FSTP19883 344 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 APEX1P27695 318 aaKnown RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 PMPCAQ10713 525 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 SNAI3Q3KNW1 292 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 SFXN4Q6P4A7 337 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 LRRTM1Q86UE6 522 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 CXorf67Q86X51 503 aaPredicted RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 ZNF584Q8IVC4 421 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 CROCCP3Q8IVE0 287 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 ST6GALNAC3Q8NDV1 305 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 OR52H1Q8NGJ2 320 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 AP3S1Q92572 193 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 LYZL4Q96KX0 146 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 GFI1Q99684 422 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 SOX7Q9BT81 388 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 SLITRK2Q9H156 845 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 SP140LQ9H930 580 aa20.78■□□□□ 0.92
SNX3-203ENST00000368979 CRNNQ9UBG3 495 aaPredicted RBP20.78■□□□□ 0.92
SNX3-203ENST00000368979 PDCD5O14737 125 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 TBX1O43435 398 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 LMX1BO60663 402 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 UBE2NP61088 152 aaKnown RBP20.77■□□□□ 0.92
SNX3-203ENST00000368979 TSC22D1Q15714 1073 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 Q6ZSR3 168 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 DOK3Q7L591 496 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 MDP1Q86V88 176 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 PLPP7Q8NBV4 271 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 OR10A2Q9H208 303 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 FOXJ3Q9UPW0 622 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 AK6Q9Y3D8 172 aaKnown RBP20.77■□□□□ 0.92
SNX3-203ENST00000368979 PEX16Q9Y5Y5 336 aa20.77■□□□□ 0.92
SNX3-203ENST00000368979 A0A0G2JNJ9 132 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms