RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PRSS12P56730 875 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 OR6K6Q8NGW6 343 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 ITLN1Q8WWA0 313 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 RAB1CQ92928 201 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 SLAMF6Q96DU3 332 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF799Q96GE5 643 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 SLC30A2Q9BRI3 323 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF665Q9H7R5 613 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 H0YL77 283 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 SURF4O15260 269 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 GLCEO94923 617 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 IGHV2-5P01817 119 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 TNFSF4P23510 183 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 SNAI3Q3KNW1 292 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 FAHD1Q6P587 224 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF283Q8N7M2 679 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 SPTSSAQ969W0 71 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 DUS3LQ96G46 650 aaKnown RBP16■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF582Q96NG8 517 aaPredicted RBP16■□□□□ 0.15
CKS1B-203ENST00000368439 OR2V2Q96R30 315 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 SIGLEC11Q96RL6 698 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 MMADHCQ9H3L0 296 aaPredicted RBP16■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF556Q9HAH1 456 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 SLC25A19Q9HC21 320 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 TMEM106BQ9NUM4 274 aa16■□□□□ 0.15
CKS1B-203ENST00000368439 TMEFF2Q9UIK5 374 aaPredicted RBP16■□□□□ 0.15
CKS1B-203ENST00000368439 ARHGAP32A7KAX9 2087 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 IGHV2-70P01814 119 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 MSMBP08118 114 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 TNFRSF1AP19438 455 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 DAPP51397 102 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 SLC3A1Q07837 685 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 DRAM2Q6UX65 266 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 TIGD4Q8IY51 512 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 OR13G1Q8NGZ3 307 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 TIMD4Q96H15 378 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 KCNJ15Q99712 375 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 NPTNQ9Y639 398 aa15.99■□□□□ 0.15
CKS1B-203ENST00000368439 COL6A5A8TX70 2615 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF878C9JN71 531 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 IFNA2P01563 188 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 HMGN1P05114 100 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 SELEP16581 610 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 GSTT1P30711 240 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 ATP6AP1Q15904 470 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 TMEM236Q5W0B7 351 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 PLBD1Q6P4A8 553 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 DPY19L4Q7Z388 723 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 GLCCI1Q86VQ1 547 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
CKS1B-203ENST00000368439 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 BHLHE23Q8NDY6 225 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 OR10AD1Q8NGE0 317 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 OR5K1Q8NHB7 308 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 TMEM186Q96B77 213 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 MEGF10Q96KG7 1140 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 INTS14Q96SY0 518 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 AMELYQ99218 206 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 COPS4Q9BT78 406 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 LPAR2Q9HBW0 351 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 GCM1Q9NP62 436 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 HIF1ANQ9NWT6 349 aa15.98■□□□□ 0.15
CKS1B-203ENST00000368439 PRR23D1E9PI22 279 aaPredicted RBP15.97■□□□□ 0.15
CKS1B-203ENST00000368439 PRR23D2P0DMB1 279 aaPredicted RBP15.97■□□□□ 0.15
CKS1B-203ENST00000368439 SRD5A1P18405 259 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 SLC2A5P22732 501 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 THBS2P35442 1172 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 SLC6A9P48067 706 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 PRKXP51817 358 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 ZNF92Q03936 586 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 MALLQ13021 153 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 EIF2B1Q14232 305 aaKnown RBP15.97■□□□□ 0.15
CKS1B-203ENST00000368439 GLYATL3Q5SZD4 288 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 PGAP1Q75T13 922 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 ASRGL1Q7L266 308 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 CPOQ8IVL8 374 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 PARP8Q8N3A8 854 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 OR6N2Q8NGY6 317 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 OR51F2Q8NH61 342 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 OR2AE1Q8NHA4 323 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 RNF133Q8WVZ7 376 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 DNAJC9Q8WXX5 260 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 OTULINQ96BN8 352 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 ZMYND19Q96E35 227 aaPredicted RBP15.97■□□□□ 0.15
CKS1B-203ENST00000368439 ABHD6Q9BV23 337 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 REPIN1Q9BWE0 567 aaKnown RBP15.97■□□□□ 0.15
CKS1B-203ENST00000368439 OR51V1Q9H2C8 321 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 G6PC2Q9NQR9 355 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 CENPMQ9NSP4 180 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 TMEM100Q9NV29 134 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 PPP1R3CQ9UQK1 317 aa15.97■□□□□ 0.15
CKS1B-203ENST00000368439 WNK2Q9Y3S1 2297 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 F5H5P2 479 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 PRODHO43272 600 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 PLPP2O43688 288 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 HLA-DPB1P04440 258 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 SLC2A1P11166 492 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 HNF1AP20823 631 aa15.96■□□□□ 0.15
CKS1B-203ENST00000368439 PAICSP22234 425 aaKnown RBP15.96■□□□□ 0.15
CKS1B-203ENST00000368439 MMP16P51512 607 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms