RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OGG1O15527 345 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 LIPAP38571 399 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR2G3Q8NGZ4 309 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CLDN16Q9Y5I7 305 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 KLK3P07288 261 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 COX6CP09669 75 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP8Q13202 625 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 BTN1A1Q13410 526 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CADM4Q8NFZ8 388 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR1S2Q8NGQ3 325 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 GALMQ96C23 342 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR10C1Q96KK4 312 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PARP12Q9H0J9 701 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 HS3ST2Q9Y278 367 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ABHD14A-ACY1A0A1B0GW23 586 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRAMEF27A3QJZ7 478 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRAMEF25A6NGN4 478 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRAMEF4O60810 478 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRAMEF9Q5VWM5 478 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C9orf57Q5W0N0 161 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 GOLT1BQ9Y3E0 138 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CACNA1DQ01668 2161 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TSPAN11A1L157 253 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TARM1B6A8C7 271 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNHIT1O43257 154 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TLX2O43763 284 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF616Q08AN1 781 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35E1Q96K37 410 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C20orf27Q9GZN8 174 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MBTPS2O43462 519 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 AGFG1P52594 562 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MYPOPQ86VE0 399 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR6X1Q8NH79 312 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 FLRT3Q9NZU0 649 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ADRA2AP08913 450 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C6P13671 934 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ABHD17BQ5VST6 288 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NAT6Q93015 286 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLX1AQ9BQ83 275 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CEACAM3P40198 252 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR1E2P47887 323 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TNFRSF17Q02223 184 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C1orf185Q5T7R7 199 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 RNF111Q6ZNA4 994 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 LHFPL2Q6ZUX7 228 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C2orf50Q96LR7 162 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR5M11Q96RB7 305 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF727A8MUV8 499 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 B4GALT3O60512 393 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MAS1P04201 325 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SRSF6Q13247 344 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRICKLE4Q2TBC4 344 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CAPNS2Q96L46 248 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CRB3Q9BUF7 120 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TRIOBPQ9H2D6 2365 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 HLA-DRB1P01911 266 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TBPL1P62380 186 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SUSD1Q6UWL2 747 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CALHM3Q86XJ0 350 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF573Q86YE8 665 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SAXO1Q8IYX7 474 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR13H1Q8NG92 308 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR4C5Q8NGB2 326 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35G5Q96KT7 338 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TINAGL1Q9GZM7 467 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NRSN2Q9GZP1 204 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 COA4Q9NYJ1 87 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLC5A6Q9Y289 635 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 AGPAT2O15120 278 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C8AP07357 584 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 LIAT1Q6ZQX7 453 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 GOLGA7Q7Z5G4 137 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 BSCL2Q96G97 398 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 AGMATQ9BSE5 352 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CTSVO60911 334 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP2Q05923 314 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF679Q8IYX0 411 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MARS2Q96GW9 593 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 BCL2L14Q9BZR8 327 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 IGSF5Q9NSI5 407 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 DNMT3BQ9UBC3 853 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CLN8Q9UBY8 286 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 DEGS1O15121 323 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 KNG1P01042 644 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 GP1BBP13224 206 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 KLF3P57682 345 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NTHL1P78549 312 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NIT1Q86X76 327 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM239Q8WW34 195 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SAMD8Q96LT4 415 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TNFRSF19Q9NS68 423 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PRSS37A4D1T9 235 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 QDPRP09417 244 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ACRV1P26436 265 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MRM1Q6IN84 353 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 C8orf82Q6P1X6 216 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms