RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PKMYT1Q99640 499 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SIGMAR1Q99720 223 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 CABLES2Q9BTV7 478 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 CEP290O15078 2479 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TARM1B6A8C7 271 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 M0R3H8 397 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TYROBPO43914 113 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 LDB3O75112 727 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 EEDO75530 441 aaKnown RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF26P17031 533 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 MAP2K6P52564 334 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SNU13P55769 128 aaKnown RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SCAPQ12770 1279 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 RNPS1Q15287 305 aaKnown RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF628Q5EBL2 1059 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 MORN4Q8NDC4 146 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR8B3Q8NGG8 313 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR8B2Q96RD0 313 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 KCNA7Q96RP8 456 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TUBA4BQ9H853 241 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 GIMAP2Q9UG22 337 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 GPR55Q9Y2T6 319 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 AMDHD2Q9Y303 409 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TEX264Q9Y6I9 313 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 KIAA1551Q9HCM1 1747 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 B4DXG7 233 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 H0YGG7 62 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 DNASE2O00115 360 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF264O43296 627 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 VNN1O95497 513 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 HOXB1P14653 301 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 AOAHP28039 575 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF678Q5SXM1 525 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF385CQ66K41 422 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PLAG1Q6DJT9 500 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR52W1Q6IF63 320 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PODNL1Q6PEZ8 512 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TCTEX1D1Q8N7M0 179 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 LFNGQ8NES3 379 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR52R1Q8NGF1 315 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZFAND1Q8TCF1 268 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR8B4Q96RC9 309 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 GDF15Q99988 308 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 RBFOX1Q9NWB1 397 aaKnown RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PDE4DIPQ5VU43 2346 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR51F1A6NGY5 319 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SNNO75324 88 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 MPIG6BO95866 241 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TIA1P31483 386 aaKnown RBP eCLIP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 PAFAH1B3Q15102 231 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 STXBP6Q8NFX7 210 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 APIPQ96GX9 242 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 IL17FQ96PD4 163 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CIB3Q96Q77 187 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SPXQ9BT56 116 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 FAM103A1Q9BTL3 118 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM231Q9H6L2 316 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 GSN-AS1Q9NRJ2 163 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 DNPH1O43598 174 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 HOXB5P09067 269 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 GIPP09681 153 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 GM2AP17900 193 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SGSHP51688 502 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 HIST1H3AP68431 136 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CDK5Q00535 292 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 ZP2Q05996 745 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 LTC4SQ16873 150 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CD276Q5ZPR3 534 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 KCNRGQ8N5I3 272 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 DUSP19Q8WTR2 217 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TSSK2Q96PF2 358 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 S1PR3Q99500 378 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 FGFBP2Q9BYJ0 223 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 HSD3B7Q9H2F3 369 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 DNAJB12Q9NXW2 375 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TCRBV7S3A2A0A539 114 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 UGDHO60701 494 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 NAGAP17050 411 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TBXA2RP21731 343 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 APOFQ13790 326 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 RBMS2Q15434 407 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 HMGN2P46Q86SG4 172 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 OR4D9Q8NGE8 314 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 OR5A2Q8NGI9 324 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 OR51T1Q8NGJ9 327 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 GPR148Q8TDV2 347 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CXorf58Q96LI9 332 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 MBNL1Q9NR56 388 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 RNF11Q9Y3C5 154 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 MFSD2BA6NFX1 497 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 PLPP1O14494 284 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 PSMB1P20618 241 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 BCKDHBP21953 392 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms