RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR6C6A6NF89 314 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CPSF4LA6NMK7 179 aaKnown RBP6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CENPBD1B2RD01 187 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 MCIDASD6RGH6 385 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 LGALS8O00214 317 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 SDHDO14521 159 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CHP2O43745 196 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 DOK2O60496 412 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 FMO6PO60774 539 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 TSPAN19P0C672 248 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 BGNP21810 368 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 ANOS1P23352 680 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 AQP1P29972 269 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 BMXP51813 675 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CD47Q08722 323 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMEM95Q3KNT9 176 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF826PQ6ZT77 177 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 NANOGNBQ7Z5D8 188 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 C1orf87Q8N0U7 546 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 SMYD1Q8NB12 490 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 GPR32P1Q8NGA4 272 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR6T1Q8NGN1 323 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 PFN4Q8NHR9 129 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 TCP10LQ8TDR4 215 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 NPRL2Q8WTW4 380 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 ST8SIA4Q92187 359 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 MAELQ96JY0 434 aaKnown RBP6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CLPTM1LQ96KA5 538 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR5M11Q96RB7 305 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 DDOQ99489 341 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 MCHR1Q99705 422 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 ASCL2Q99929 193 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 IKZF5Q9H5V7 419 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 RANBP3Q9H6Z4 567 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CACYBPQ9HB71 228 aaKnown RBP6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 POLE4Q9NR33 117 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 INIPQ9NRY2 104 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 PNPOQ9NVS9 261 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 CHCHD3Q9NX63 227 aaKnown RBP6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC25A37Q9NYZ2 338 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 A0A1W2PPL8 197 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 A0A1W2PRG6 482 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 IQCF6A8MYZ5 107 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 TFF1P04155 84 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 CCDC159P0C7I6 412 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 NHLRC4P0CG21 123 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 COX5BP10606 129 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 UMPSP11172 480 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 AMY2BP19961 511 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 MSR1P21757 451 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 TUBG1P23258 451 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 FPR3P25089 353 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 CD200P41217 278 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 NCALDP61601 193 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 CD83Q01151 205 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMED1Q13445 227 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 TOP3AQ13472 1001 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 DUSP7Q16829 419 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 RSPO1Q2MKA7 263 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 ENTPD8Q5MY95 495 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF613Q6PF04 617 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 KRT77Q7Z794 578 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC30A8Q8IWU4 369 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 SPERTQ8NA61 448 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR9I1Q8NGQ6 314 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 GTF2H4Q92759 462 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 SEH1LQ96EE3 360 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF582Q96NG8 517 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 NKX3-1Q99801 234 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 RAD21L1Q9H4I0 556 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 WDR55Q9H6Y2 383 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 TUBG2Q9NRH3 451 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 THUMPD1Q9NXG2 353 aaKnown RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 NDRG4Q9ULP0 352 aaKnown RBP6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLC7A7Q9UM01 511 aa6.86□□□□□ -1.31
HMGB1P39-201ENST00000366304 RYR1P21817 5038 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 OOEPA6NGQ2 149 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 C12orf71A8MTZ7 269 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 H7C1C5 153 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 CLIC1O00299 241 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 FBP2O00757 339 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 SGCEO43556 437 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR7A10O76100 309 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 PTBP3O95758 552 aaKnown RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 PAHP00439 452 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 HIST1H2ABP04908 130 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 SELLP14151 372 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 IRF2P14316 349 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 GSTT1P30711 240 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 DAP3P51398 398 aaKnown RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 GYS2P54840 703 aa6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 ABCE1P61221 599 aaKnown RBP6.85□□□□□ -1.31
HMGB1P39-201ENST00000366304 PCBD1P61457 104 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms