RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 MERTKQ12866 999 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 IFT88Q13099 833 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 PIGHQ14442 188 aaPredicted RBP2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 RBMY1FQ15415 496 aaKnown RBP2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 RNASE13Q5GAN3 156 aaKnown RBP2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 SPANXN2Q5MJ10 180 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 MYOCDQ8IZQ8 938 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 DCPSQ96C86 337 aaKnown RBP2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 C8orf44Q96CB5 159 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 NRBF2Q96F24 287 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 RBBP8Q99708 897 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 LZTS2Q9BRK4 669 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 GGTLC1Q9BX51 225 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 TMEM38AQ9H6F2 299 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 TMEM27Q9HBJ8 222 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 C8orf17Q9NRJ1 99 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 RAB20Q9NX57 234 aa2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 LYARQ9NX58 379 aaKnown RBP2.27□□□□□ -2.05
RNU6-560P-201ENST00000364007 A0A075B6Q4 140 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 GABRR3A8MPY1 467 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 CDC40O60508 579 aaKnown RBP eCLIP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 NMT2O60551 498 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 IGLV3-19P01714 112 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 IGLV3-25P01717 112 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 CD74P04233 296 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 IL4P05112 153 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 ERCC1P07992 297 aaPredicted RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 CTRB1P17538 263 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 STOMP27105 288 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 PRRX1P54821 245 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 GFERP55789 205 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 UBE2MP61081 183 aaKnown RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 CYP24A1Q07973 514 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 ZNF616Q08AN1 781 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 ILKQ13418 452 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 NCF4Q15080 339 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 TPTE2P1Q5T6R2 138 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 ADNP2Q6IQ32 1131 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 GABRG1Q8N1C3 465 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 TTC29Q8NA56 475 aaPredicted RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 CCDC148Q8NFR7 591 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 OR6Q1Q8NGQ2 317 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC25A46Q96AG3 418 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 MCUR1Q96AQ8 359 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 DYNLL2Q96FJ2 89 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 XPO6Q96QU8 1125 aaKnown RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 BPIFA3Q9BQP9 254 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 OSBPL11Q9BXB4 747 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 UCK2Q9BZX2 261 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 ZYG11BQ9C0D3 744 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC7A5P2Q9GIP4 190 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLIRPQ9GZT3 109 aaKnown RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 MRM3Q9HC36 420 aaKnown RBP2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 MED4Q9NPJ6 270 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC17A7Q9P2U7 560 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 S4R3C0 116 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 SHANK1Q9Y566 2161 aa2.26□□□□□ -2.05
RNU6-560P-201ENST00000364007 FHOD3Q2V2M9 1422 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 SYCE1LA8MT33 242 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 KRBOX1C9JBD0 128 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 NDUFC2-KCTD14E9PQ53 114 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 CHST10O43529 356 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC22A5O76082 557 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 LSM8O95777 96 aaKnown RBP2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 CLTAP09496 248 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 USF1P22415 310 aaPredicted RBP2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 POLR2IP36954 125 aaKnown RBP2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 KRTAP10-1P60331 282 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 CCNA1P78396 465 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 GCSAMLQ5JQS6 135 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 DNLZQ5SXM8 178 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 SPESP1Q6UW49 350 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 BZW1Q7L1Q6 419 aaKnown RBP2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 LYPD1Q8N2G4 141 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 TTLQ8NG68 377 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 OR56A4Q8NGH8 313 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 C17orf50Q8WW18 174 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 GSDMAQ96QA5 445 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC39A1Q9NY26 324 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 RCL1Q9Y2P8 373 aaKnown RBP2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 SIGLEC9Q9Y336 463 aa2.25□□□□□ -2.05
RNU6-560P-201ENST00000364007 IGHV1-69DA0A0B4J2H0 117 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 GABRPO00591 440 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 NME4O00746 187 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 DNAJB6O75190 326 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 CDRT1O95170 752 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 OXTP01178 125 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 ME2P23368 584 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 BMI1P35226 326 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 NBL1P41271 181 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 SLC1A2P43004 574 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 SERPINB8P50452 374 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 RAB7AP51149 207 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 NDUFA8P51970 172 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 ART3Q13508 389 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 AP1ARQ63HQ0 302 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 TWF2Q6IBS0 349 aaKnown RBP2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 TMEM53Q6P2H8 277 aa2.24□□□□□ -2.05
RNU6-560P-201ENST00000364007 EIF3MQ7L2H7 374 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms