RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PDSS1Q5T2R2 415 aa9.42□□□□□ -0.9
SMC3-201ENST00000361804 KCTD18Q6PI47 426 aaPredicted RBP9.42□□□□□ -0.9
SMC3-201ENST00000361804 ZFP82Q8N141 532 aa9.42□□□□□ -0.9
SMC3-201ENST00000361804 KLHDC7BQ96G42 594 aa9.42□□□□□ -0.9
SMC3-201ENST00000361804 SLC46A1Q96NT5 459 aa9.42□□□□□ -0.9
SMC3-201ENST00000361804 R4GMQ9 66 aa9.42□□□□□ -0.9
SMC3-201ENST00000361804 FRG2CA6NGY1 282 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 H0YIZ8 118 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 SDCBPO00560 298 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 SOCS1O15524 211 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 UBBP0CG47 229 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 UBCP0CG48 685 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 ZNF823P16415 610 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ID4P47928 161 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 RPS27AP62979 156 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 UBA52P62987 128 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 ROM1Q03395 351 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 OR51E1Q8TCB6 317 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 DCUN1D4Q92564 292 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ZNF285Q96NJ3 590 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 WWTR1Q9GZV5 400 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 PDE7BQ9NP56 450 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 DISC1C4P0D8 188 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 AGPAT2O15120 278 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 CD8AP01732 235 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 LYG2Q86SG7 212 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 LDLRAD3Q86YD5 345 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ZNF101Q8IZC7 436 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 OR10S1Q8NGN2 331 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 TSNAXQ99598 290 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 PARP12Q9H0J9 701 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 SLC25A32Q9H2D1 315 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 SEC61A2Q9H9S3 476 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 UPB1Q9UBR1 384 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 TSPAN2O60636 221 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 TTRP02766 147 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 NFYBP25208 207 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 OR51F2Q8NH61 342 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 OR1L3Q8NH93 324 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 SLC25A21Q9BQT8 299 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 EDEM2Q9BV94 578 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 GAREM1Q9H706 876 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ZNF319Q9P2F9 582 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 A0A1W2PR77 199 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 NPIPB7O75200 414 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 DXOO77932 396 aaKnown RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 FOLR1P15328 257 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 AWAT2Q6E213 333 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ETV3LQ6ZN32 361 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 ANGPTL5Q86XS5 388 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 AQP3Q92482 292 aa9.41□□□□□ -0.9
SMC3-201ENST00000361804 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
SMC3-201ENST00000361804 PRRC2CQ9Y520 2896 aaKnown RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 EFSO43281 561 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 ZNF208O43345 1280 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 RAD51DO75771 328 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 AHSA1O95433 338 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 CD74P04233 296 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 PGCP20142 388 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 OR3A4PP47883 348 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 SLC26A5P58743 744 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 KIAA0895LQ68EN5 471 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 CLEC9AQ6UXN8 241 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 ZNF813Q6ZN06 617 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 SLC25A42Q86VD7 318 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 DTX1Q86Y01 620 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 OR10R2Q8NGX6 335 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 FAM71F1Q96KD3 344 aaPredicted RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 C5orf34Q96MH7 638 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 ALX4Q9H161 411 aaPredicted RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 TLNRD1Q9H1K6 362 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 OR5AC2Q9NZP5 309 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 RALGAPA1Q6GYQ0 2036 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 MPIG6BO95866 241 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 GUSBP08236 651 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 IL32P24001 234 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 AKR1C3P42330 323 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 STK11Q15831 433 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 CLVS2Q5SYC1 327 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 ACOT7LQ6ZUV0 252 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 PNLDC1Q8NA58 520 aaKnown RBP9.4□□□□□ -0.9
SMC3-201ENST00000361804 ASB17Q8WXJ9 295 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 C11orf40Q8WZ69 217 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 SUSD2Q9UGT4 822 aa9.4□□□□□ -0.9
SMC3-201ENST00000361804 A0A0D9SG52 128 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms