RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 ZSCAN4Q8NAM6 433 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 DEFB108BQ8NET1 73 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 OR51A4Q8NGJ6 313 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 HAVCR2Q8TDQ0 301 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 FAM3DQ96BQ1 224 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CACNG6Q9BXT2 260 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MMP28Q9H239 520 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 LIPGQ9Y5X9 500 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZFYVE26Q68DK2 2539 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CEP192Q8TEP8 1941 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DOCK10Q96BY6 2186 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ISPDA4D126 451 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR6C65A6NJZ3 312 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TMEM200CA6NKL6 621 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 EFNA2O43921 213 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF254O75437 659 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 NEURL1O76050 574 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ACTL6AO96019 429 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 AMY2AP04746 511 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 IFI6P09912 130 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 GABRB1P18505 474 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DUSP1P28562 367 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 MTNR1BP49286 362 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 SEC61A1P61619 476 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 POU4F3Q15319 338 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 LTC4SQ16873 150 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CHRFAM7AQ494W8 412 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR2T2Q6IF00 324 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TPRA1Q86W33 373 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ASCC1Q8N9N2 400 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OIT3Q8WWZ8 545 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZCCHC14Q8WYQ9 949 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 HAS2Q92819 552 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TIMP4Q99727 224 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 MICU1Q9BPX6 476 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 BCL7BQ9BQE9 202 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 THAP7Q9BT49 309 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 PTDSS2Q9BVG9 487 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR10A4Q9H209 315 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 PCDHB16Q9NRJ7 776 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 PRSS50Q9UI38 385 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 FLVCR1Q9Y5Y0 555 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 PTPN13Q12923 2485 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 A0A0G2JMP0 313 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 A0A0X1KG70 313 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TRAPPC2LH3BP13 241 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ATXN7O15265 892 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TP53P04637 393 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF12P17014 697 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 BLVRBP30043 206 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CRYBB2P43320 205 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TMPRSS3P57727 454 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 FXYD4P59646 89 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CNN3Q15417 329 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ABCA11PQ4W5N1 156 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 FIP1L1Q6UN15 594 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 STAC2Q6ZMT1 411 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF517Q6ZMY9 492 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 KCTD9Q7L273 389 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 FJX1Q86VR8 437 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 SLC22A24Q8N4F4 322 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR4M2Q8NGB6 313 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR4M1Q8NGD0 313 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR1J1Q8NGS3 322 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DYNC2LI1Q8TCX1 351 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TOMM40LQ969M1 308 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CREB3L1Q96BA8 519 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 MS4A3Q96HJ5 214 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 C4orf45Q96LM5 186 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 SORCS2Q96PQ0 1159 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 VRK1Q99986 396 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 JAM3Q9BX67 310 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TMEM59Q9BXS4 323 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DPAGT1Q9H3H5 408 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 GPR35Q9HC97 309 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DLL3Q9NYJ7 618 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF69Q9UC07 566 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 EXOGQ9Y2C4 368 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 IGKV1D-43A0A0B4J1Z2 117 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 FAM221AA4D161 298 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 INMT-MINDY4F8WBC2 141 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 NME2P1O60361 137 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 WNT11O96014 354 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 MT-ND4P03905 459 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 IRF2P14316 349 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ELK1P19419 428 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ACHEP22303 614 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 NME2P22392 152 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CD40LGP29965 261 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 NBL1P41271 181 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 MFGE8Q08431 387 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF239Q16600 458 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 CCDC58Q4VC31 144 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 RNASE10Q5GAN6 216 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 OR2A2Q6IF42 318 aa4.86□□□□□ -1.63
PCDH11X-202ENST00000361655 DOK3Q7L591 496 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms