RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 RPL7L1Q6DKI1 246 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 CMBLQ96DG6 245 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 PRO1933Q9H354 126 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 FKRPQ9H9S5 495 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC5A6Q9Y289 635 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 R4GMQ9 66 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 CEP290O15078 2479 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 PPP5D1E7EU14 171 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 ABCD4O14678 606 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 PRSS54Q6PEW0 395 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 RBMS3Q6XE24 437 aaKnown RBP14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 Q6ZSR6 202 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 TMEM123Q8N131 208 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 BCORP1Q8N888 145 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 OR51E1Q8TCB6 317 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 TBC1D29Q9UFV1 150 aa14.44□□□□□ -0.1
CLSTN1-201ENST00000361311 PRSS37A4D1T9 235 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 BLACEA4D250 179 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 RAB27BO00194 218 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 FABP4P15090 132 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 DUSP1P28562 367 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC25A1P53007 311 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 METAP1P53582 386 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 DCAF7P61962 342 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 LINC01555Q8NAE3 123 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 FAM3CQ92520 227 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 NRTNQ99748 197 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 LPAR3Q9UBY5 353 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 LY86O95711 162 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 DBHP09172 617 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 GLULP15104 373 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF345Q14585 488 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CNN3Q15417 329 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 TMEM41BQ5BJD5 291 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 RAET1LQ5VY80 246 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 OR4N2Q8NGD1 307 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 HSD17B8Q92506 261 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 NINJ1Q92982 152 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 SEH1LQ96EE3 360 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 PRRX2Q99811 253 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CABLES2Q9BTV7 478 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 PATZ1Q9HBE1 687 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 B9D1Q9UPM9 204 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 C7orf77A4D0Y5 90 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CD63P08962 238 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 GSTP1P09211 210 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CDKN2AP42771 156 aaKnown RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 NKX2-1P43699 371 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 ZP1P60852 638 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 C5orf46Q6UWT4 87 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 ZFP62Q8NB50 900 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 PIGTQ969N2 578 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 NKX2-4Q9H2Z4 354 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 SFXN1Q9H9B4 322 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 RAB18Q9NP72 206 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 GHRLQ9UBU3 117 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 UBR3Q6ZT12 1888 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CEBPZOSA8MTT3 80 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 PRRT4C9JH25 899 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 DPP4P27487 766 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 CSNK1A1P48729 337 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF547Q8IVP9 402 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 OR5L2Q8NGL0 311 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 NRSN2Q9GZP1 204 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 C19orf12Q9NSK7 152 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC39A9Q9NUM3 307 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 KCNMB2Q9Y691 235 aa14.43□□□□□ -0.1
CLSTN1-201ENST00000361311 A8MXK9 166 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 PRKNO60260 465 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ADRA2AP08913 450 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ABOP16442 354 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 EEF1A1P68104 462 aaKnown RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 LDLRAD3Q86YD5 345 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 NAA11Q9BSU3 229 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SUCNR1Q9BXA5 334 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 MRM2Q9UI43 246 aaKnown RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SULT2B1O00204 365 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 TGOLN2O43493 480 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ADAP1O75689 374 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 HOXB9P17482 250 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 CALCRP30988 508 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 H2BFSP57053 126 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 H3F3AP84243 136 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 OR2A2Q6IF42 318 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 WNT2BQ93097 391 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 FBXO17Q96EF6 278 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC46A1Q96NT5 459 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 GNG13Q9P2W3 67 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 WASF3Q9UPY6 502 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 MPTX1A8MV57 137 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 AKR7A3O95154 331 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 CTHP32929 405 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ZNF485Q8NCK3 441 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 ALX4Q9H161 411 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SLC2A4RGQ9NR83 387 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 NECAP2Q9NVZ3 263 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 C19orf25Q9UFG5 118 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 TRAV8-7A0A075B6U6 113 aa14.42□□□□□ -0.1
CLSTN1-201ENST00000361311 SERPINA7P05543 415 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms