RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ERGIC1Q969X5 290 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 TBX15Q96SF7 602 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 MMADHCQ9H3L0 296 aaPredicted RBP17.52■□□□□ 0.4
CD47-202ENST00000361309 SAR1AQ9NR31 198 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 MRGBPQ9NV56 204 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 CMTM6Q9NX76 183 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 KIF17Q9P2E2 1029 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 CTSZQ9UBR2 303 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 POMT1Q9Y6A1 747 aa17.52■□□□□ 0.4
CD47-202ENST00000361309 CENPVL3A0A0U1RRI6 287 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 HMGB1P1B2RPK0 211 aaPredicted RBP17.51■□□□□ 0.39
CD47-202ENST00000361309 DCTN6O00399 190 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 MMP9P14780 707 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 RAD23AP54725 363 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 SF3A3Q12874 501 aaKnown RBP eCLIP17.51■□□□□ 0.39
CD47-202ENST00000361309 GK2Q14410 553 aaPredicted RBP17.51■□□□□ 0.39
CD47-202ENST00000361309 CD276Q5ZPR3 534 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 PGM2L1Q6PCE3 622 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 CBLL1Q75N03 491 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 SSMEM1Q8WWF3 244 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 GATAD2BQ8WXI9 593 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 HSH2DQ96JZ2 352 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 RBM4BQ9BQ04 359 aaKnown RBP17.51■□□□□ 0.39
CD47-202ENST00000361309 ANKRD19PQ9H560 264 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 ERVK-18Q9QC07 812 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 RNF114Q9Y508 228 aa17.51■□□□□ 0.39
CD47-202ENST00000361309 CXCR6O00574 342 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 ACSM4P0C7M7 580 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 CRABP1P29762 137 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 FXYD6P3P58550 94 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 COX10Q12887 443 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 PDCD1Q15116 288 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 KRTAP27-1Q3LI81 207 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 SFRP4Q6FHJ7 346 aaPredicted RBP17.5■□□□□ 0.39
CD47-202ENST00000361309 ASPHD2Q6ICH7 369 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 DNM1P34Q6PK57 102 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 TSEN54Q7Z6J9 526 aaKnown RBP17.5■□□□□ 0.39
CD47-202ENST00000361309 NAA40Q86UY6 237 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 TBC1D15Q8TC07 691 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 DYRK2Q92630 601 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 SLCO4A1Q96BD0 722 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 RSRC1Q96IZ7 334 aaKnown RBP17.5■□□□□ 0.39
CD47-202ENST00000361309 PKP2Q99959 881 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 ACOXLQ9NUZ1 547 aa17.5■□□□□ 0.39
CD47-202ENST00000361309 F5H5K5 113 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 TXNDC12O95881 172 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 LIPFP07098 398 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 RPS6KA3P51812 740 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 RPL15P61313 204 aaKnown RBP17.49■□□□□ 0.39
CD47-202ENST00000361309 LIPEQ05469 1076 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 DBPQ10586 325 aaPredicted RBP17.49■□□□□ 0.39
CD47-202ENST00000361309 DPY19L2P2Q6ZN68 376 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 CFAP77Q6ZQR2 320 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 CYP4Z1Q86W10 505 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 LINC00346Q8IVM7 164 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 SLC15A3Q8IY34 581 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 BOLLQ8N9W6 283 aaKnown RBP17.49■□□□□ 0.39
CD47-202ENST00000361309 LINC01006Q8NI28 216 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 UBE2FQ969M7 185 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 RCN3Q96D15 328 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 WDFY2Q96P53 400 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 PITX2Q99697 317 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 SRA1Q9HD15 236 aaKnown RBP17.49■□□□□ 0.39
CD47-202ENST00000361309 RNF7Q9UBF6 113 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 B9D1Q9UPM9 204 aa17.49■□□□□ 0.39
CD47-202ENST00000361309 IGLV1-36A0A0B4J1U3 117 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 C3orf80F5H4A9 247 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 GSTA4O15217 222 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 GPR137BO60478 399 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 SERPINA1P01009 418 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 LCATP04180 440 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 MDH1P40925 334 aaKnown RBP17.48■□□□□ 0.39
CD47-202ENST00000361309 OMPP47874 163 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 MALLQ13021 153 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 OR8G1Q15617 311 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 KCNJ8Q15842 424 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 METTL11BQ5VVY1 283 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 SLC18B1Q6NT16 456 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 PGAP1Q75T13 922 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 PNLDC1Q8NA58 520 aaKnown RBP17.48■□□□□ 0.39
CD47-202ENST00000361309 SPRYD4Q8WW59 207 aaPredicted RBP17.48■□□□□ 0.39
CD47-202ENST00000361309 LHX4Q969G2 390 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 TRIM15Q9C019 465 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 RASSF4Q9H2L5 321 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 FN3KRPQ9HA64 309 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 SMURF1Q9HCE7 757 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 ARMCX1Q9P291 453 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 AP3M1Q9Y2T2 418 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 ENPP4Q9Y6X5 453 aa17.48■□□□□ 0.39
CD47-202ENST00000361309 IGHV1-69DA0A0B4J2H0 117 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 A0A1W2PRQ8 180 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 LGALS8O00214 317 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 ADAM20O43506 726 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 PPP1R3DO95685 299 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 IGHV1-69P01742 117 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 IGHV4-59P01825 116 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 H1F0P07305 194 aaKnown RBP17.47■□□□□ 0.39
CD47-202ENST00000361309 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
CD47-202ENST00000361309 CA6P23280 308 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 DGCR6Q14129 220 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms