RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TRAV17A0A0B4J275 112 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 LOC102725191A0A1B0GVB3 256 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 TUBAL3A6NHL2 446 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ANXA2P2A6NMY6 339 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CREBL2O60519 120 aaPredicted RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 UPK3AO75631 287 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 GLSO94925 669 aaPredicted RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ANXA2P07355 339 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CRABP1P29762 137 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CENPAP49450 140 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 STARP49675 285 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 GFRA1P56159 465 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CLDN12P56749 244 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 RAC3P60763 192 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 TSPAN5P62079 268 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 EGR3Q06889 387 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 EXOSC2Q13868 293 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 RNFT1Q5M7Z0 435 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CDC20BQ86Y33 519 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 EXD3Q8N9H8 876 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 MAP6Q96JE9 813 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 TSSK2Q96PF2 358 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 TAS2R8Q9NYW2 309 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 VSX1Q9NZR4 365 aaPredicted RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 FRRS1LQ9P0K9 344 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 MGAT4CQ9UBM8 478 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 MRM2Q9UI43 246 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 IKZF2Q9UKS7 526 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 PTPRQQ9UMZ3 2332 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 LOC105371267A0A1B0GV96 52 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 GIPP09681 153 aaPredicted RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 CDK2P24941 298 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SSTR2P30874 369 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SELENOPP49908 381 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 BIDP55957 195 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 TAS2R20P59543 309 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 RAP2BP61225 183 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 H3F3AP84243 136 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC10A1Q14973 349 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 TOR2AQ5JU69 321 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 EEF1A1P5Q5VTE0 462 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SEZ6L2Q6UXD5 910 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 Q6ZTK2 550 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 WDR76Q9H967 626 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 MED29Q9NX70 200 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 KCNN3Q9UGI6 736 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ZZEF1O43149 2961 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 RRP8O43159 456 aaKnown RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 RBBP9O75884 186 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 NDUFB6O95139 128 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ENPP1P22413 925 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 SOX2P48431 317 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 CLDN15P56746 228 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 PSMA6P60900 246 aaKnown RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 PMP22Q01453 160 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 RASGEF1BQ0VAM2 473 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 GGNQ86UU5 652 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ZADH2Q8N4Q0 377 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF676Q8N7Q3 588 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 GPR148Q8TDV2 347 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF69Q9UC07 566 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 NUP50Q9UKX7 468 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 CHD8Q9HCK8 2581 aa11.66□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 K7EM74 188 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 DCTN6O00399 190 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC16A7O60669 478 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF254O75437 659 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 TOXO94900 526 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 HLA-DQA2P01906 255 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 RAD52P43351 418 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 EIF1AXP47813 144 aaKnown RBP11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 SUCLG1P53597 346 aaKnown RBP11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 POU4F3Q15319 338 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 LRRTM1Q86UE6 522 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 GLB1L2Q8IW92 636 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 GCDHQ92947 438 aaPredicted RBP11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 RBP7Q96R05 134 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC6A15Q9H2J7 730 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 LDAHQ9H6V9 325 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 EXO5Q9H790 373 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 ACKR4Q9NPB9 350 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 STEAP1Q9UHE8 339 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 B9D1Q9UPM9 204 aa11.65□□□□□ -0.54
SQSTM1-201ENST00000360718 CACNA1CQ13936 2221 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms