RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 FAM221AA4D161 298 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 EGR3Q06889 387 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF385BQ569K4 471 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 SPATA6Q9NWH7 488 aaPredicted RBP12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 DEFA4P12838 97 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF250P15622 560 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 NOVP48745 357 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 CYHR1Q6ZMK1 362 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 DOK1Q99704 481 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 B3GAT1Q9P2W7 334 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF217O75362 1048 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 SUB1P53999 127 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 C19orf47Q8N9M1 422 aaKnown RBP12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 OR51F2Q8NH61 342 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 M1APQ8TC57 530 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 DYNLRB1Q9NP97 96 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 MYH1P12882 1939 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 MYH4Q9Y623 1939 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 CITO14578 2027 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 NSG1A0A0A6YYJ2 146 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 TSPAN12O95859 305 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF154Q13106 437 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 PTOV1Q86YD1 416 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 LILRA3Q8N6C8 439 aaPredicted RBP12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 FAM3CQ92520 227 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 PRRX2Q99811 253 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 P2RY12Q9H244 342 aa12.2□□□□□ -0.46
CCDC144A-203ENST00000360495 MBTPS2O43462 519 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 EIF1BO60739 113 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 CST7O76096 145 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 CCL5P13501 91 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 TCN2P20062 427 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 GSG1Q2KHT4 349 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 OR10G3Q8NGC4 313 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 CSF3RQ99062 836 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 EDEM2Q9BV94 578 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 TINAGL1Q9GZM7 467 aaPredicted RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RIMS4Q9H426 269 aaPredicted RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 SLC22A13Q9Y226 551 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 NAT2P11245 290 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 DHODHQ02127 395 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 EMC4Q5J8M3 183 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RNASEKQ6P5S7 137 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 GPR32P1Q8NGA4 272 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 SDF2Q99470 211 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 BOKQ9UMX3 212 aaPredicted RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 hCG_1809904A0A1W2PP81 198 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 A0A1W2PR64 198 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 A0A1W2PRV1 198 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEM127O75204 238 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 GUSBP08236 651 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 OR5G3P0C626 314 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 ENPP1P22413 925 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RAG2P55895 527 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 VHLLQ6RSH7 139 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 BVESQ8NE79 360 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 EDAQ92838 391 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 PHYHIPLQ96FC7 376 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 MYADML2A6NDP7 307 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 AKR7A3O95154 331 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RPS27P42677 84 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 RAB7AP51149 207 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 PRTGQ2VWP7 1150 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 Q6ZN92 141 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 BHLHE23Q8NDY6 225 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 ADGRL4Q9HBW9 690 aa12.19□□□□□ -0.46
CCDC144A-203ENST00000360495 ARPC3O15145 178 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 MUC20Q8N307 709 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 OR4S1Q8NGB4 309 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 HCFC1R1Q9NWW0 138 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF346Q9UL40 294 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 H3BP45 60 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 OR2J2O76002 312 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 CTSAP10619 480 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 TRMT12Q53H54 448 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF383Q8NA42 475 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 CIB3Q96Q77 187 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 EMC6Q9BV81 110 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEFF2Q9UIK5 374 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 SLC5A6Q9Y289 635 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ASB1Q9Y576 335 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms