RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FOXK1P85037 733 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 RSU1Q15404 277 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ABCA11PQ4W5N1 156 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 FNDC7Q5VTL7 733 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 LRRTM1Q86UE6 522 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 MUC20Q8N307 709 aaPredicted RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 OR11H4Q8NGC9 324 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 KCNG3Q8TAE7 436 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 NPAS1Q99742 590 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 STRADBQ9C0K7 418 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 DUSP15Q9H1R2 295 aaPredicted RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 SLCO5A1Q9H2Y9 848 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 PLEKHJ1Q9NW61 149 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ABI3Q9P2A4 366 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 HRH3Q9Y5N1 445 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 STMND1H3BQB6 276 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 SCGNO76038 276 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 OR4E1P0C645 316 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 PI3P19957 117 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ITGA3P26006 1051 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 DLSTP36957 453 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 NPY4RP50391 375 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 FGL1Q08830 312 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 MFAP5Q13361 173 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 ELFN2Q5R3F8 820 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 GSG1LQ6UXU4 331 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 CATSPERDQ86XM0 798 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 GALNT11Q8NCW6 608 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 MAFAQ8NHW3 353 aaPredicted RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 TOMM40LQ969M1 308 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 CNTD2Q9H8S5 307 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 A0A1W2PQM1 296 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 SNRPGP15A8MWD9 76 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 GDF9O60383 454 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 PMS2P2O95744 297 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 WNT11O96014 354 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 APOC3P02656 99 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 BTCP35070 178 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 RBMXP38159 391 aaKnown RBP9.98□□□□□ -0.81
SSU72-202ENST00000359060 ESX1Q8N693 406 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 GVQW1Q8N7I0 195 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 NOXO1Q8NFA2 376 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 C17orf50Q8WW18 174 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ACKR4Q9NPB9 350 aa9.98□□□□□ -0.81
SSU72-202ENST00000359060 ZNF850A8MQ14 1090 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 APOC1P02654 83 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 PDGFAP04085 211 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 HRH1P35367 487 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 GJC3Q8NFK1 279 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 DNASE2BQ8WZ79 361 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 ZCCHC4Q9H5U6 513 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 CA10Q9NS85 328 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 EHFQ9NZC4 300 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 DNAJC13O75165 2243 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 CIB4A0PJX0 185 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 GJE1A6NN92 205 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MS4A18H0YCH9 400 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 TMEM127O75204 238 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 ABHD16AO95870 558 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MS4A18Q3C1V0 323 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 FAM180AQ6UWF9 173 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 AAED1Q7RTV5 226 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 APCDD1LQ8NCL9 501 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 OR1J2Q8NGS2 313 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 RNASE11Q8TAA1 199 aaKnown RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MCHR2Q969V1 340 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 CDC6Q99741 560 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 CHST6Q9GZX3 395 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 OR10A2Q9H208 303 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 SCPEP1Q9HB40 452 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 ZNF275Q9NSD4 429 aaPredicted RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 MRPS18BQ9Y676 258 aaKnown RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 PCDH15Q96QU1 1955 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 A0A1B0GTQ1 180 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 CLPSP04118 112 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 POU3F2P20265 443 aaPredicted RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 MSR1P21757 451 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MTCP1P56278 107 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 PRSS12P56730 875 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 EXT1Q16394 746 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 TMPPEQ6ZT21 453 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 OR4D6Q8NGJ1 314 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 ZNF519Q8TB69 540 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 ZNF524Q96C55 264 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 WDR89Q96FK6 387 aaPredicted RBP9.97□□□□□ -0.81
SSU72-202ENST00000359060 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
SSU72-202ENST00000359060 MASP2O00187 686 aa9.96□□□□□ -0.81
SSU72-202ENST00000359060 SDCBPO00560 298 aaPredicted RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 NUPL2O15504 423 aaKnown RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 EIF1BO60739 113 aaKnown RBP9.96□□□□□ -0.81
SSU72-202ENST00000359060 SCO1O75880 301 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms