RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ADAMTS17Q8TE56 1095 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 CHMP1AQ9HD42 196 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 VSX1Q9NZR4 365 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 MOKQ9UQ07 419 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 BSNQ9UPA5 3926 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 LYRM1O43325 122 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 TRAF3IP2O43734 574 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 SC5DO75845 299 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 IGHEP01854 428 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 S100A8P05109 93 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ANXA3P12429 323 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 EIF3IQ13347 325 aaKnown RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 OR2B11Q5JQS5 317 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 SYS1Q8N2H4 156 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 GTPBP8Q8N3Z3 284 aaPredicted RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 OR14L1PQ8NHC6 308 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 OTOSQ8NHW6 89 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ATF6BQ99941 703 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ACACAQ13085 2346 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 A0A0J9YW62 118 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 PIN1P1O15428 100 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 PNPP00491 289 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 DLX5P56178 289 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 SPCS3P61009 180 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 COQ8AQ8NI60 647 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 VRK1Q99986 396 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 SRXN1Q9BYN0 137 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 EMC7Q9NPA0 242 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 SLC22A13Q9Y226 551 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 B3GALT5Q9Y2C3 310 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 AK6Q9Y3D8 172 aaKnown RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 OGG1O15527 345 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 NEURL1O76050 574 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 IGHMP01871 453 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 CXCL3P19876 107 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 DSCR4P56555 118 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 SNRPEP62304 92 aaKnown RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 MFGE8Q08431 387 aaPredicted RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 SNTB1Q13884 538 aaKnown RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 P2RY14Q15391 338 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 TMPPEQ6ZT21 453 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 PXKQ7Z7A4 578 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 UEVLDQ8IX04 471 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 PRSS35Q8N3Z0 413 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF385AQ96PM9 386 aaKnown RBP11.23□□□□□ -0.61
GGPS1-202ENST00000358966 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 CSAG2Q9Y5P2 127 aa11.23□□□□□ -0.61
GGPS1-202ENST00000358966 IQCMA0A1B0GVH7 501 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 WT1P19544 449 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 POU3F2P20265 443 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 ANOS1P23352 680 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 TAS2R43P59537 309 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 GLO1Q04760 184 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 H3F3CQ6NXT2 135 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 GLYATL2Q8WU03 294 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 MIB2Q96AX9 1013 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 SGCZQ96LD1 299 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 ABHD6Q9BV23 337 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 GPR87Q9BY21 358 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 SEC61A2Q9H9S3 476 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 PTTG3PQ9NZH4 202 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 RASD1Q9Y272 281 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 KIAA1549Q9HCM3 1950 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 FAM166BA8MTA8 275 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 C21orf140B9A014 251 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 DNASE1P24855 282 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 GDF1P27539 372 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 APEX1P27695 318 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 CLDN17P56750 224 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
GGPS1-202ENST00000358966 NHLRC1Q6VVB1 395 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 FAM220AQ7Z4H9 259 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 ARMC10Q8N2F6 343 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 DNAAF1Q8NEP3 725 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 SLC26A10Q8NG04 563 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 PTPRBP23467 1997 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 A0A0G2JK05 382 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 SULT1C2O00338 296 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 NKX2-8O15522 239 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 CBR3O75828 277 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 TOXO94900 526 aa11.22□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF43P17038 809 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms