RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 HIST2H2BCQ6DN03 193 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 SYS1Q8N2H4 156 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 ZNF649Q9BS31 505 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
TPM1-206ENST00000358278 SP140LQ9H930 580 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 ISG20L2Q9H9L3 353 aaKnown RBP13.15□□□□□ -0.3
TPM1-206ENST00000358278 CA10Q9NS85 328 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 ERGIC3Q9Y282 383 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 J3QW42 95 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 TBX1O43435 398 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 GPRIN2O60269 458 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 MT-ND5P03915 603 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 CHN2P52757 468 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 PPP1CBP62140 327 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 TLE4Q04727 773 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
TPM1-206ENST00000358278 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 OR2G6Q5TZ20 316 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 PRSS48Q7RTY5 328 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 OR5L1Q8NGL2 311 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.31
TPM1-206ENST00000358278 PGAM5Q96HS1 289 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 COG8Q96MW5 612 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 R4GMQ9 66 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 UNC79Q9P2D8 2635 aa13.14□□□□□ -0.31
TPM1-206ENST00000358278 TMEM129A0AVI4 362 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 FAM221AA4D161 298 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 MT-ND2P03891 347 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 GLRXP35754 106 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 NKX6-1P78426 367 aaPredicted RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 MALLQ13021 153 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 RGS7BPQ6MZT1 257 aaPredicted RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 C1orf174Q8IYL3 243 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 OR52N1Q8NH53 320 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 C14orf79Q96F83 325 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 CDCA4Q9BXL8 241 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 MOB1AQ9H8S9 216 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 FAM206AQ9NX38 181 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 SPG11Q96JI7 2443 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 FBN2P35556 2912 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 HTR1AP08908 422 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SSTR2P30874 369 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 PSMB10P40306 273 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 MMP16P51512 607 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
TPM1-206ENST00000358278 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 GFOD2Q3B7J2 385 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ZNF544Q6NX49 715 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ZNF295-AS1Q8N0V1 137 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 OR52H1Q8NGJ2 320 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SLC25A40Q8TBP6 338 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 RORBQ92753 470 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 FBXW5Q969U6 566 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SIGLEC11Q96RL6 698 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 OR2J1Q9GZK6 312 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 SNX5Q9Y5X3 404 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 APCP25054 2843 aa13.13□□□□□ -0.31
TPM1-206ENST00000358278 A0A1W2PPR1 153 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 E7EQL1 145 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 HS3ST1O14792 307 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 ATE1O95260 518 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 PNPP00491 289 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 THBS4P35443 961 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 WNT4P56705 351 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 MRPL28Q13084 256 aaKnown RBP13.12□□□□□ -0.31
TPM1-206ENST00000358278 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 PRSS45Q7RTY3 260 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 OR2AE1Q8NHA4 323 aa13.12□□□□□ -0.31
TPM1-206ENST00000358278 LILRB1Q8NHL6 650 aaPredicted RBP13.12□□□□□ -0.31
TPM1-206ENST00000358278 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms