RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PIGMQ9H3S5 423 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 EXO5Q9H790 373 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 UBQLN4Q9NRR5 601 aa11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF107Q9UII5 783 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-202ENST00000357348 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 H0YC42 278 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 MAS1P04201 325 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 ACHEP22303 614 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 ACTBP60709 375 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 ACTG1P63261 375 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 OR51D1Q8NGF3 324 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 C3orf49Q96BT1 292 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 KLHDC3Q9BQ90 382 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 POFUT1Q9H488 388 aa11.3□□□□□ -0.6
RTFDC1-202ENST00000357348 TRAV18A0A075B6X5 111 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 SERINC4A6NH21 518 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 SLC17A2O00624 439 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TO15178 435 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 OIP5O43482 229 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 DOK2O60496 412 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 PLATP00750 562 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 CD14P08571 375 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 LIPCP11150 499 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 POU3F4P49335 361 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TAS2R19P59542 299 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 C11orf88Q6PI97 169 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 M1APQ8TC57 530 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM106AQ96A25 262 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 COMMD4Q9H0A8 199 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 SCPEP1Q9HB40 452 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 MMP25Q9NPA2 562 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM171A2A8MVW0 826 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 NKX2-8O15522 239 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 ATG12O94817 140 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 CD74P04233 296 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 ALOX5APP20292 161 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 SDHAP31040 664 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 PPIAP62937 165 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 DEFA5Q01523 94 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 HFEQ30201 348 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 GXYLT1Q4G148 440 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 KLHL26Q53HC5 615 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 JAZF1Q86VZ6 243 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 BEST3Q8N1M1 668 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 OR10G3Q8NGC4 313 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 RELTQ969Z4 430 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 TBL1XR1Q9BZK7 514 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 MPDZO75970 2070 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
RTFDC1-202ENST00000357348 A0A1B0GTH9 108 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 OR5H14A6NHG9 310 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ITGA5P08648 1049 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 CD82P27701 267 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 KIR3DL2P43630 455 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 EMC4Q5J8M3 183 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 OR2W3Q7Z3T1 314 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 OR8K3Q8NH51 312 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ADAMTS17Q8TE56 1095 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 FAM3DQ96BQ1 224 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 SEH1LQ96EE3 360 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 SLCO5A1Q9H2Y9 848 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 WDR76Q9H967 626 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ACACAQ13085 2346 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 APC2O95996 2303 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 FGF16O43320 207 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ITGA3P26006 1051 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 AQP2P41181 271 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 STARP49675 285 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms