RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PAX8Q06710 450 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 HNRNPA0Q13151 305 aaKnown RBP8.94□□□□□ -0.98
CAPN3-204ENST00000356316 ZNF181Q2M3W8 571 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 SLC18B1Q6NT16 456 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 PGAP1Q75T13 922 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 DOK3Q7L591 496 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 MRPL21Q7Z2W9 205 aaKnown RBP8.94□□□□□ -0.98
CAPN3-204ENST00000356316 KLBQ86Z14 1044 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 LINC00346Q8IVM7 164 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 SLC26A10Q8NG04 563 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 OR8B3Q8NGG8 313 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 GNPDA2Q8TDQ7 276 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 RAB40AQ8WXH6 277 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 SPTSSAQ969W0 71 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 ERGIC1Q969X5 290 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 SLCO4A1Q96BD0 722 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 DHRS1Q96LJ7 313 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 NSMCE2Q96MF7 247 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 DUX5Q96PT3 197 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 OR8B2Q96RD0 313 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 C1QTNF5Q9BXJ0 243 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 FAM107BQ9H098 131 aa8.94□□□□□ -0.98
CAPN3-204ENST00000356316 MLNRO43193 412 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 KRT36O76013 467 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 FSTL3O95633 263 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 HLA-DPB1P04440 258 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 ACSM4P0C7M7 580 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 PPIAL4GP0DN37 164 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 RRM2P31350 389 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 GGT2P36268 569 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 MXRA7P84157 204 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
CAPN3-204ENST00000356316 GK2Q14410 553 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-204ENST00000356316 TAF13Q15543 124 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 OR8G1Q15617 311 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 KCNJ8Q15842 424 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 KLF17Q5JT82 389 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-204ENST00000356316 SAMD4BQ5PRF9 694 aaKnown RBP8.93□□□□□ -0.98
CAPN3-204ENST00000356316 SLC35F1Q5T1Q4 408 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 RPL13AP3Q6NVV1 102 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 CFAP77Q6ZQR2 320 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 COLCA1Q6ZS62 124 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 ZBTB46Q86UZ6 589 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 BCL6BQ8N143 479 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-204ENST00000356316 FAM86B1Q8N7N1 296 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 CELF2-AS1Q8N7Q2 184 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 OR52L1Q8NGH7 329 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 TMEM246Q9BRR3 403 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 FUZQ9BT04 418 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 SLC22A4Q9H015 551 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 MYLK2Q9H1R3 596 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 KIF17Q9P2E2 1029 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 CLN8Q9UBY8 286 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 CYB5R1Q9UHQ9 305 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 KCNG2Q9UJ96 466 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 PCDHGB1Q9Y5G3 927 aa8.93□□□□□ -0.98
CAPN3-204ENST00000356316 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 KIR2DS1A0A191URI9 304 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 OR6C68A6NDL8 312 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 GGT3PA6NGU5 568 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 J3QL48 77 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 LCE2BO14633 110 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 HSD17B1P14061 328 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 EGR1P18146 543 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 MSX2P35548 267 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-204ENST00000356316 PITPNBP48739 271 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.92□□□□□ -0.98
CAPN3-204ENST00000356316 TSPAN31Q12999 210 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 RSPO1Q2MKA7 263 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-204ENST00000356316 ZNF404Q494X3 552 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 CD276Q5ZPR3 534 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 DCDC5Q6ZRR9 648 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 NAA40Q86UY6 237 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 PARP8Q8N3A8 854 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 LINC00471Q8N535 108 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 SDR9C7Q8NEX9 313 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 PROKR2Q8NFJ6 384 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 OR4C15Q8NGM1 316 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 OR2T4Q8NH00 348 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 CDRT15Q96T59 188 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 FN3KQ9H479 309 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 FN3KRPQ9HA64 309 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 IL1RAPQ9NPH3 570 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 NDE1Q9NXR1 346 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 DOCK11Q5JSL3 2073 aa8.92□□□□□ -0.98
CAPN3-204ENST00000356316 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 M0R135 149 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 GMDSO60547 372 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
CAPN3-204ENST00000356316 CA6P23280 308 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 GATA4P43694 442 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 GSSP48637 474 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 NPY4RP50391 375 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 IL13RA1P78552 427 aa8.91□□□□□ -0.98
CAPN3-204ENST00000356316 MZT1Q08AG7 82 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms