RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 GPANK1O95872 356 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 RAC2P15153 192 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 SERPINF1P36955 418 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 RAG2P55895 527 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 UBE2IP63279 158 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 HLXQ14774 488 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 EXOSC6Q5RKV6 272 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 VN1R4Q7Z5H5 301 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 ZFP82Q8N141 532 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 SUMF2Q8NBJ7 301 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 EMC6Q9BV81 110 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 A0A087WZY1 265 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 TRIM64BA6NI03 449 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 LINC01387J3KSC0 135 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 MOSPD3O75425 235 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 FAM209AQ5JX71 171 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 H3F3CQ6NXT2 135 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 WDR74Q6RFH5 385 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 CA5BP1Q8WTZ4 195 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF764Q96H86 408 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 NEUROG3Q9Y4Z2 214 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 GNB3P16520 340 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 ELFN2Q5R3F8 820 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 GPR157Q5UAW9 335 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 LHX9Q9NQ69 397 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 DUSP13Q9UII6 198 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 AKR7A3O95154 331 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 MFGE8Q08431 387 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 PRICKLE4Q2TBC4 344 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 GALNT16Q8N428 558 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 LUZP4Q9P127 313 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 SIRT4Q9Y6E7 314 aaPredicted RBP11.11□□□□□ -0.63
COLCA1-201ENST00000355430 DSPPQ9NZW4 1301 aa11.11□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 MPPED1O15442 326 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 GREM1O60565 184 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 MGMTP16455 207 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 OR1M1Q8NGA1 313 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PTP4A1Q93096 173 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 SDHCQ99643 169 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CNTNAP3Q9BZ76 1288 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 KLHL13Q9P2N7 655 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ATP23Q9Y6H3 246 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 NKX2-2O95096 273 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CT62P0C5K7 136 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PLA1AQ53H76 456 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 OR1L3Q8NH93 324 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PCYT1BQ9Y5K3 369 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 SLC22A20A6NK97 555 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CBR3O75828 277 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 FOLR1P15328 257 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF250P15622 560 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF74Q16587 644 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 TMED6Q8WW62 240 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 TTC9Q92623 222 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 SPACA5Q96QH8 159 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 TINAGL1Q9GZM7 467 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 LOC285556D6RIA3 1793 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CDONQ4KMG0 1287 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 RTL6Q6ICC9 239 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 MRM1Q6IN84 353 aaKnown RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 H1FNTQ75WM6 255 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ADGRG3Q86Y34 549 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-201ENST00000355430 SIGLEC11Q96RL6 698 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 NKX6-3A6NJ46 265 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ATG12O94817 140 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 ABHD16AO95870 558 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 HRH1P35367 487 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CX3CR1P49238 355 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 S100A12P80511 92 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 OR11G2Q8NGC1 345 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 OR51E1Q8TCB6 317 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 C2CD4CQ8TF44 421 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CT55Q8WUE5 264 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 CTSFQ9UBX1 484 aa11.1□□□□□ -0.63
COLCA1-201ENST00000355430 HPXP02790 462 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 RNF4P78317 190 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms