RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RCL1Q9Y2P8 373 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 NSG1A0A0A6YYJ2 146 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF814B7Z6K7 855 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 FPR2P25090 351 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 FKBP2P26885 142 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 NXF2Q9GZY0 626 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MTFP1Q9UDX5 166 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 DEGS1O15121 323 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 NHLRC2Q8NBF2 726 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MS4A10Q96PG2 267 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 EDEM2Q9BV94 578 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 LMAN1LQ9HAT1 526 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 PSENENQ9NZ42 101 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF346Q9UL40 294 aaKnown RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 AVPR2P30518 371 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 GSK3AP49840 483 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MLF1P58340 268 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 LHFPL2Q6ZUX7 228 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MUC20Q8N307 709 aaPredicted RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 TEX101Q9BY14 249 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 BOKQ9UMX3 212 aaPredicted RBP11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 IL10RAQ13651 578 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 ACKR1Q16570 336 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM173AQ9BQD7 235 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 CACFD1Q9UGQ2 172 aa11.56□□□□□ -0.56
SYNCRIP-201ENST00000355238 PLPP2O43688 288 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ATF1P18846 271 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 CCKARP32238 428 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 CARD18P57730 90 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 CLEC12BQ2HXU8 276 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SIRT6Q8N6T7 355 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SEC11CQ9BY50 192 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 S1PR5Q9H228 398 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 CA14Q9ULX7 337 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRAMEF25A6NGN4 478 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF732B4DXR9 585 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 RFC3P40938 356 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 APOBEC1P41238 236 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PLAC9Q5JTB6 97 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC25A43Q8WUT9 341 aaPredicted RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 UQCC1Q9NVA1 299 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC2A1P11166 492 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.565e-6■■■■□ 23
SYNCRIP-201ENST00000355238 NTHL1P78549 312 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ETFDHQ16134 617 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 BCL7CQ8WUZ0 217 aaPredicted RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC35E1Q96K37 410 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 FAM234AQ9H0X4 552 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PTRH2Q9Y3E5 179 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 COL14A1Q05707 1796 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 A0A1W2PR48 441 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SERPINE3A8MV23 424 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 CT45A10P0DMU9 189 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNF250P15622 560 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 DRD1P21728 446 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 GALR1P47211 349 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 YPEL5P62699 121 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 KLHDC9Q8NEP7 349 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 GPR32P1Q8NGA4 272 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 PIAS3Q9Y6X2 628 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 XRCC2O43543 280 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 FZD6O60353 706 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 GLI4P10075 376 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ARL16Q0P5N6 197 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC39A11Q8N1S5 342 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 SIRT5Q9NXA8 310 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 FBXO4Q9UKT5 387 aa11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 NOSIPQ9Y314 301 aaKnown RBP11.55□□□□□ -0.56
SYNCRIP-201ENST00000355238 ASPDHA6ND91 283 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 TRMT12Q53H54 448 aaKnown RBP11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 LILRA3Q8N6C8 439 aaPredicted RBP11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 ZNRF4Q8WWF5 429 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 SIGLEC11Q96RL6 698 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 ENPP1P22413 925 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 DHRS2Q13268 280 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 MARCH3Q86UD3 253 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR11L1Q8NGX0 322 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 ADGRL4Q9HBW9 690 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 HNF1AP20823 631 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 TINAGL1Q9GZM7 467 aaPredicted RBP11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 CHST11Q9NPF2 352 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 FBXO34Q9NWN3 711 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 DAPP1Q9UN19 280 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 A6NCN8 305 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 SLC31A2O15432 143 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 GABRA1P14867 456 aa11.54□□□□□ -0.56
SYNCRIP-201ENST00000355238 TCN2P20062 427 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms