RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 OGG1O15527 345 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 PPIHO43447 177 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 SEMA4FO95754 770 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 RNH1P13489 461 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 AGAP20933 346 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 GRK6P43250 576 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 DIO1P49895 249 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 INPP5JQ15735 1006 aaPredicted RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 CD226Q15762 336 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 NSUN5P2Q63ZY6 315 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 RPL22L1Q6P5R6 122 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 SPNS3Q6ZMD2 512 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SLC35F3Q8IY50 421 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 BCORP1Q8N888 145 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZNF321PQ8N8H1 164 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR6N2Q8NGY6 317 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 NPRL2Q8WTW4 380 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZBTB8AQ96BR9 441 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 INTS14Q96SY0 518 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SEC61A2Q9H9S3 476 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 GSKIPQ9P0R6 139 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 EML5Q05BV3 1969 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SPAG17Q6Q759 2223 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SERINC4A6NH21 518 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 IFITM5A6NNB3 132 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 LDLRAD4O15165 306 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 NME2P1O60361 137 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 NUDT14O95848 222 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 PLGP00747 810 aaPredicted RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 CT45A8P0DMV1 189 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 CT45A9P0DMV2 189 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 MDKP21741 143 aaPredicted RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 CT45A2Q5DJT8 189 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR5AP2Q8NGF4 316 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR10AC1Q8NH08 325 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 PHYHIPQ92561 330 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 FAM131CQ96AQ9 280 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 KIRREL1Q96J84 757 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 GFI1Q99684 422 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SLC6A7Q99884 636 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZNF426Q9BUY5 554 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR8D2Q9GZM6 311 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR10A5Q9H207 317 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SEMA6CQ9H3T2 930 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 RXFP3Q9NSD7 469 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 HAO2Q9NYQ3 351 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 TRAV1-2A0A0B4J238 106 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZNF727A8MUV8 499 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 PPP1R2P9O14990 202 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 DOK2O60496 412 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ITGA10O75578 1167 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 CNOT4O95628 575 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 LSM6P62312 80 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 RIPPLY1Q0D2K3 151 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 BIKQ13323 160 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 TMEM104Q8NE00 496 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 OR4K17Q8NGC6 315 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ZNF563Q8TA94 476 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 CCDC107Q8WV48 283 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SYT4Q9H2B2 425 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 MRPL22Q9NWU5 206 aaKnown RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 CLEC1BQ9P126 229 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 SERTAD3Q9UJW9 196 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 GDF2Q9UK05 429 aaPredicted RBP8.42□□□□□ -1.06
SMG6-202ENST00000354901 FBXO7Q9Y3I1 522 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 V9GY05 133 aa8.42□□□□□ -1.06
SMG6-202ENST00000354901 ABCA7Q8IZY2 2146 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 TMEM265A0A087WTH1 108 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 A0A087WUJ7 227 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 IGHV2-5P01817 119 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 HLA-DQA2P01906 255 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 GABRG2P18507 467 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 LPAR6P43657 344 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 AFF3P51826 1226 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 NKX6-1P78426 367 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 LTBQ06643 244 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 DHRS2Q13268 280 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MED25Q71SY5 747 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 DPY19L4Q7Z388 723 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 BPIFB2Q8N4F0 458 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 OR51D1Q8NGF3 324 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 SLC2A12Q8TD20 617 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 FOXRED1Q96CU9 486 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 S100A13Q99584 98 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MRPS33Q9Y291 106 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 MMACHCQ9Y4U1 282 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 TMEM184BQ9Y519 407 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 C9orf170A2RU37 121 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 FOXS1O43638 330 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 F10P00742 488 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 HOXC4P09017 264 aaPredicted RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 OR8U9P0C7N5 309 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 AKAIN1P0CW23 69 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 MECP2P51608 486 aaKnown RBP8.41□□□□□ -1.06
SMG6-202ENST00000354901 STEAP1BQ6NZ63 245 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 ZNF343Q6P1L6 599 aa8.41□□□□□ -1.06
SMG6-202ENST00000354901 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms