RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 OR8B12Q8NGG6 310 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 THRSPQ92748 146 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 SLIRPQ9GZT3 109 aaKnown RBP13.6□□□□□ -0.23
CTSA-202ENST00000354880 NOX4Q9NPH5 578 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 B3GNT2Q9NY97 397 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 Q9UFV3 132 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 ARPC4-TTLL3A0A0A6YYG9 625 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 P2RY10O00398 339 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 CLEC2LP0C7M8 214 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 COX5BP10606 129 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 CASP6P55212 293 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 GSG1Q2KHT4 349 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 LUZP2Q86TE4 346 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 CXorf67Q86X51 503 aaPredicted RBP13.6□□□□□ -0.23
CTSA-202ENST00000354880 TMEM106AQ96A25 262 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 SLC25A46Q96AG3 418 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 PGAM5Q96HS1 289 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 NOX3Q9HBY0 568 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
CTSA-202ENST00000354880 DHDHQ9UQ10 334 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 PMF1-BGLAPU3KQ54 211 aa13.6□□□□□ -0.23
CTSA-202ENST00000354880 TRAV1-2A0A0B4J238 106 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 E9PLN8 166 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 PIN1P1O15428 100 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 RAF1P04049 648 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
CTSA-202ENST00000354880 BMP5P22003 454 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 APEX1P27695 318 aaKnown RBP13.59□□□□□ -0.23
CTSA-202ENST00000354880 RORCP51449 518 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 UBE2NP61088 152 aaKnown RBP13.59□□□□□ -0.23
CTSA-202ENST00000354880 PLP2Q04941 152 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 LSAMPQ13449 338 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 TPRA1Q86W33 373 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 ASB5Q8WWX0 329 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 VKORC1Q9BQB6 163 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 ZNF319Q9P2F9 582 aa13.59□□□□□ -0.23
CTSA-202ENST00000354880 TRBV5-7A0A0A0MS05 114 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 MSTNO14793 375 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 SYT7O43581 403 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 CLPXO76031 633 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 CD2P06729 351 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 SRMP19623 302 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 ANOS1P23352 680 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 HOXC12P31275 282 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 HGFACQ04756 655 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 ZNF404Q494X3 552 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 ZNF474Q6S9Z5 364 aaPredicted RBP13.58□□□□□ -0.24
CTSA-202ENST00000354880 MDP1Q86V88 176 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 ORAI1Q96D31 301 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 KCNS3Q9BQ31 491 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 BARHL1Q9BZE3 327 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 PIGMQ9H3S5 423 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 COL6A6A6NMZ7 2263 aa13.58□□□□□ -0.24
CTSA-202ENST00000354880 A0A0U1RQV5 110 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 A0A1B0GVI7 797 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 SMIM30A4D0T7 59 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 TBX1O43435 398 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 STOMP27105 288 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
CTSA-202ENST00000354880 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 NCCRP1Q6ZVX7 275 aaPredicted RBP13.57□□□□□ -0.24
CTSA-202ENST00000354880 COMMD2Q86X83 199 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 ZNF584Q8IVC4 421 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 OR52H1Q8NGJ2 320 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 OR13C3Q8NGS6 347 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 SP140LQ9H930 580 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 GPR84Q9NQS5 396 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 PCNX1Q96RV3 2341 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 LOC100509620A0A075B734 347 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 A0A1B0GTI1 187 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 CA7P43166 264 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 GFOD2Q3B7J2 385 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 C17orf78Q8N4C9 275 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 RND1Q92730 232 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 CNTNAP3BQ96NU0 1288 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 CNTNAP3Q9BZ76 1288 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
CTSA-202ENST00000354880 OR10A2Q9H208 303 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 TCF7L1Q9HCS4 588 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 MEMO1Q9Y316 297 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 A3GALT2U3KPV4 340 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
CTSA-202ENST00000354880 RELNP78509 3460 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 CACNA1BQ00975 2339 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 A0A1W2PR80 420 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 C5orf49A4QMS7 147 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 C5orf63A6NC05 138 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 EEF1E1-BLOC1S5C9J1V9 151 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 EEF1E1O43324 174 aaKnown RBP13.56□□□□□ -0.24
CTSA-202ENST00000354880 NCR1O76036 304 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 LCATP04180 440 aa13.56□□□□□ -0.24
CTSA-202ENST00000354880 SERPINA5P05154 406 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms