RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF705GA8MUZ8 300 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF587BE7ETH6 402 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SDCBPO00560 298 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ABHD16AO95870 558 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CST4P01036 141 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PAX6P26367 422 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CHATP28329 748 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 RPUSD3Q6P087 351 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PEG10Q86TG7 708 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 COMMD2Q86X83 199 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SLC43A2Q8N370 569 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 EXD3Q8N9H8 876 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PNLDC1Q8NA58 520 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 HSD17B11Q8NBQ5 300 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 OR2L8Q8NGY9 312 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 THRSPQ92748 146 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MENTQ9BUN1 341 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PBDC1Q9BVG4 233 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 NMNAT2Q9BZQ4 307 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SLC5A7Q9GZV3 580 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SMOC1Q9H4F8 434 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM74BQ9NUR3 256 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FLVCR1Q9Y5Y0 555 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CYB5BO43169 146 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 PLXNA2O75051 1894 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 PNPP00491 289 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 HIST1H1BP16401 226 aaKnown RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 RPS4Y1P22090 263 aaKnown RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 UBE2KP61086 200 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 PKIAP61925 76 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 SLC17A1Q14916 467 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF239Q16600 458 aaKnown RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 TEX30Q5JUR7 227 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 OR2T2Q6IF00 324 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF343Q6P1L6 599 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 SPNS3Q6ZMD2 512 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 OR4D6Q8NGJ1 314 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 FAM213BQ8TBF2 198 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 RNF128Q8TEB7 428 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 C2orf50Q96LR7 162 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF558Q96NG5 402 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 TAAR9Q96RI9 348 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF700Q9H0M5 742 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 SLC2A8Q9NY64 477 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 LUZP4Q9P127 313 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 CA14Q9ULX7 337 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 DAPP1Q9UN19 280 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 TAAR5O14804 337 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 JTBO76095 146 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 NUDT14O95848 222 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF10P21506 573 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 RBMXP38159 391 aaKnown RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ACTR1BP42025 376 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM33P57088 247 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 PLAURQ03405 335 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 EGR3Q06889 387 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 SLC18B1Q6NT16 456 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 TERB2Q8NHR7 220 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-201ENST00000352993 SPACA5Q96QH8 159 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 OR5B2Q96R09 309 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 ATG101Q9BSB4 218 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 RAB11FIP5Q9BXF6 653 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 OR11A1Q9GZK7 315 aa6.84□□□□□ -1.31
BRCA1-201ENST00000352993 A0A087WUJ7 227 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 A0A087WZY1 265 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SMCO3A2RU48 225 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 MEGF11A6BM72 1044 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SEC14L6B5MCN3 397 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SPINT1O43278 529 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SLC16A7O60669 478 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 TIMP1P01033 207 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 HOXC4P09017 264 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 AMY2BP19961 511 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CSRP1P21291 193 aaKnown RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 CTNNB1P35222 781 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 IGFALSP35858 605 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 WASP42768 502 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 MFGE8Q08431 387 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 KCTD18Q6PI47 426 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.83□□□□□ -1.322e-8■■■■■ 27.8
BRCA1-201ENST00000352993 PRSS41Q7RTY9 318 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-201ENST00000352993 OR5H2Q8NGV7 314 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 RPS4Y2Q8TD47 263 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 ASB5Q8WWX0 329 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 METTL21AQ8WXB1 218 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 AQP10Q96PS8 301 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SERINC2Q96SA4 455 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 TUBA4BQ9H853 241 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 LRIT1Q9P2V4 623 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 HHLA2Q9UM44 414 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 POMT1Q9Y6A1 747 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 SPAG17Q6Q759 2223 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 BORCS7-ASMTA0A0B4J1R7 106 aa6.83□□□□□ -1.32
BRCA1-201ENST00000352993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms