RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 NFYAP23511 347 aaPredicted RBP12.35□□□□□ -0.43
TRIM4-201ENST00000349062 PTH2RP49190 550 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 RAP1BP61224 184 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 RAP1AP62834 184 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 OPN5Q6U736 354 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 RTN4RL2Q86UN3 420 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
TRIM4-201ENST00000349062 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 HES7Q9BYE0 225 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 GDF2Q9UK05 429 aaPredicted RBP12.35□□□□□ -0.43
TRIM4-201ENST00000349062 NBASA2RRP1 2371 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 PRR14LQ5THK1 2151 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 C5orf63A6NC05 138 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 RFPL3SP0C7P2 107 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 SULT1A3P0DMM9 295 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 SULT1A4P0DMN0 295 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
TRIM4-201ENST00000349062 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 OR2Y1Q8NGV0 311 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 STEAP1Q9UHE8 339 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF254O75437 659 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 RBBP9O75884 186 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 P04436 131 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 FGF5P12034 268 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 NAGAP17050 411 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 ITGA3P26006 1051 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 PTBP1P26599 531 aaKnown RBP eCLIP12.34□□□□□ -0.432e-9■■■■□ 21.1
TRIM4-201ENST00000349062 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
TRIM4-201ENST00000349062 CD163Q86VB7 1156 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
TRIM4-201ENST00000349062 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 B3GALT5Q9Y2C3 310 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 FAM166BA8MTA8 275 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 HCKP08631 526 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 DBHP09172 617 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 CCNOP22674 350 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 CCR9P51686 369 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 LINC00303Q3SY05 128 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 BEX5Q5H9J7 111 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 OR4S1Q8NGB4 309 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 CT55Q8WUE5 264 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 TNFAIP8L1Q8WVP5 186 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
TRIM4-201ENST00000349062 C1orf198Q9H425 327 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 BANF2Q9H503 90 aa12.34□□□□□ -0.43
TRIM4-201ENST00000349062 OTOGLQ3ZCN5 2332 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 OR5H15A6NDH6 313 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF20P17024 532 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 GDF1P27539 372 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 HTR2CP28335 458 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 MMP15P51511 669 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 ATP1A1-AS1Q5TC04 95 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 OR52N4Q8NGI2 321 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 ASB17Q8WXJ9 295 aa12.33□□□□□ -0.43
TRIM4-201ENST00000349062 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.43
TRIM4-201ENST00000349062 PHYHO14832 338 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 C4BPBP20851 252 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 AKR1C2P52895 323 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 AKR1C1Q04828 323 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 GLT8D1Q68CQ7 371 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 OR10K1Q8NGX5 313 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 ELP5Q8TE02 316 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 MARC2Q969Z3 335 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.44
TRIM4-201ENST00000349062 IFT46Q9NQC8 304 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 SPTA1P02549 2419 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 M0R296 226 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 CXCL13O43927 109 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 ASPHD2Q6ICH7 369 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 P4HTMQ9NXG6 502 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 FOXJ2Q9P0K8 574 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 TCFL5Q9UL49 500 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 KCNMB2Q9Y691 235 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 R4GMQ9 66 aa12.33□□□□□ -0.44
TRIM4-201ENST00000349062 TMEM272A0A1B0GTI8 110 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 RP2O75695 350 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 CD3DP04234 171 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF121P58317 390 aaPredicted RBP12.32□□□□□ -0.44
TRIM4-201ENST00000349062 TGIF1Q15583 401 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 OR4D6Q8NGJ1 314 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 PBOV1Q9GZY1 135 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 GPR84Q9NQS5 396 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms