RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CLEC18CQ8NCF0 446 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 OR8B12Q8NGG6 310 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 PBOV1Q9GZY1 135 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 POFUT1Q9H488 388 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 GTF2A1LQ9UNN4 478 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 COL12A1Q99715 3063 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 USP9XQ93008 2570 aaPredicted RBP16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 NGFP01138 241 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 ZNF35P13682 527 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 CPEP16870 476 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 CELP19835 753 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 TGFBR2P37173 567 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 NAAAQ02083 359 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 BDH1Q02338 343 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 SLC3A1Q07837 685 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 SPOCK1Q08629 439 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 BLMHQ13867 455 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 TBC1D28Q2M2D7 210 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 ODF4Q2M2E3 257 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 ZNF101Q8IZC7 436 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 RDH10Q8IZV5 341 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 PGLYRP3Q96LB9 341 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 PDCD1LG2Q9BQ51 273 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 SOX7Q9BT81 388 aa16.43■□□□□ 0.22
CHMP4A-201ENST00000347519 IGHV2OR16-5A0A0B4J2B6 119 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 TRBV2A0A0J9YWF9 115 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 H3BSH0 61 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 TTRP02766 147 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 LCATP04180 440 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 RPL5P46777 297 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 MRPL28Q13084 256 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 C3orf36Q3SXR2 165 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 CCDC58Q4VC31 144 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 C1QTNF12Q5T7M4 302 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 COLCA1Q6ZS62 124 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 RFPL4BQ6ZWI9 263 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 PHC2Q8IXK0 858 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 OR13F1Q8NGS4 319 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 RGP1Q92546 391 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 UFD1Q92890 307 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 PGAM5Q96HS1 289 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 DCLRE1CQ96SD1 692 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 C1QTNF5Q9BXJ0 243 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 OR51B6Q9H340 312 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 CDH20Q9HBT6 801 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 NDRG3Q9UGV2 375 aa16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 NUFIP1Q9UHK0 495 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 SF3B6Q9Y3B4 125 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-201ENST00000347519 SIAH2O43255 324 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 PLPP2O43688 288 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 ZFPL1O95159 310 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 CD40P25942 277 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 CCR9P51686 369 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 TAS2R43P59537 309 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 RPS25P62851 125 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 BCL2L15Q5TBC7 163 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 ELMOD2Q8IZ81 293 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 OR1J2Q8NGS2 313 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 OR13C5Q8NGS8 318 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 OR10AC1Q8NH08 325 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 SMIM19Q96E16 107 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 YIPF6Q96EC8 236 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 STARD10Q9Y365 291 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 ADGRG4Q8IZF6 3080 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 HECTD1Q9ULT8 2610 aa16.41■□□□□ 0.22
CHMP4A-201ENST00000347519 TUBAL3A6NHL2 446 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 P2RY10O00398 339 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 TBX1O43435 398 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 FAM157BP0CG42 384 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 MAGEB1P43366 347 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 RGS6P49758 472 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 SATL1Q86VE3 508 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 OR2AE1Q8NHA4 323 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 SSC4DQ8WTU2 575 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 GHSRQ92847 366 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 SGK3Q96BR1 496 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 LYZL4Q96KX0 146 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 MOV10Q9HCE1 1003 aaKnown RBP16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 CADP27708 2225 aa16.4■□□□□ 0.22
CHMP4A-201ENST00000347519 A0A1B0GTI1 187 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 ACOD1A6NK06 481 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 APOC1P02654 83 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 EPXP11678 715 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 IGFBP2P18065 325 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 PAX7P23759 505 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 PRSS12P56730 875 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 ERVS71-1P61550 626 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 RPS11P62280 158 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 BSPH1Q075Z2 132 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 INSL4Q14641 139 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 GLYATL3Q5SZD4 288 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 HAVCR2Q8TDQ0 301 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM203Q969S6 136 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 DACH2Q96NX9 599 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 MOB1AQ9H8S9 216 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 CRIM1Q9NZV1 1036 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 DOPEY1Q5JWR5 2465 aa16.39■□□□□ 0.21
CHMP4A-201ENST00000347519 ATP6V1G2-DDX39BF2Z307 99 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms