RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ZNF75AQ96N20 296 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
ECM1-201ENST00000346569 SLC25A18Q9H1K4 315 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 MIXL1Q9H2W2 232 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 ASF1BQ9NVP2 202 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 CRNNQ9UBG3 495 aaPredicted RBP9.58□□□□□ -0.88
ECM1-201ENST00000346569 ATPIF1Q9UII2 106 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 DOCK7Q96N67 2140 aa9.58□□□□□ -0.88
ECM1-201ENST00000346569 PRRC2CQ9Y520 2896 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 TRAV8-7A0A075B6U6 113 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 A0A0U1RQV5 110 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 ZNF503-AS2A6NEH8 195 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 NOTOA8MTQ0 251 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 SLC2A1P11166 492 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 EPXP11678 715 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 BMP4P12644 408 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 HOXB1P14653 301 aaPredicted RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 IGFBP3P17936 291 aaPredicted RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 CFL1P23528 166 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 TNFSF8P32971 234 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 THBS2P35442 1172 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 PEX19P40855 299 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 ETV6P41212 452 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 TPTEP56180 551 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 RAB1AP62820 205 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 HGFACQ04756 655 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 DYNC1I2Q13409 638 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 GABRA6Q16445 453 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 SLC25A35Q3KQZ1 300 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 SLC36A2Q495M3 483 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 DRAM2Q6UX65 266 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 FAM57BQ71RH2 274 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 DPPA2Q7Z7J5 298 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 RPRMLQ8N4K4 120 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 ZNF433Q8N7K0 673 aaPredicted RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 CPEB3Q8NE35 698 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 OR51E1Q8TCB6 317 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 S100ZQ8WXG8 99 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 SPTSSAQ969W0 71 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 KCTD12Q96CX2 325 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 ZFP3Q96NJ6 502 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 WDFY2Q96P53 400 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 C6orf62Q9GZU0 229 aaPredicted RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 SLC24A3Q9HC58 644 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 ZNF275Q9NSD4 429 aaPredicted RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 FOXJ3Q9UPW0 622 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 DHDHQ9UQ10 334 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 AK6Q9Y3D8 172 aaKnown RBP9.57□□□□□ -0.88
ECM1-201ENST00000346569 ARHGAP21Q5T5U3 1957 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 PIEZO2Q9H5I5 2752 aa9.57□□□□□ -0.88
ECM1-201ENST00000346569 CLDN25C9JDP6 229 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 H3BSH0 61 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 PDCD5O14737 125 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 LMX1BO60663 402 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 TMEM127O75204 238 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 HLA-HP01893 362 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 ABOP16442 354 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 COX5AP20674 150 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 ARR3P36575 388 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 KLRB1Q12918 225 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 EIF2S3LQ2VIR3 472 aaKnown RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 PRR30Q53SZ7 412 aaPredicted RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 SFXN4Q6P4A7 337 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 COLCA1Q6ZS62 124 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 CCDC36Q8IYA8 594 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 GABRG1Q8N1C3 465 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 PARP16Q8N5Y8 322 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 CNEP1R1Q8N9A8 125 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 ZNF610Q8N9Z0 462 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 OR14K1Q8NGZ2 314 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 ACOT12Q8WYK0 555 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 SGK3Q96BR1 496 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 PGAM5Q96HS1 289 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 LYZL4Q96KX0 146 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 SOX7Q9BT81 388 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 RNF121Q9H920 327 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 PLGRKTQ9HBL7 147 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 SMURF1Q9HCE7 757 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 TCF7L1Q9HCS4 588 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 V9GY05 133 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 TTLL8A6PVC2 850 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 PRRG2O14669 202 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 SYT7O43581 403 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 IL2RAP01589 272 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 CD2P06729 351 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 ANXA2P07355 339 aaKnown RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 TMIGD3P0DMS9 266 aaPredicted RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 GLI4P10075 376 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 SLC2A2P11168 524 aaPredicted RBP9.56□□□□□ -0.88
ECM1-201ENST00000346569 ATF1P18846 271 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 FSTP19883 344 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 S100A5P33763 92 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 DDOSTP39656 456 aa9.56□□□□□ -0.88
ECM1-201ENST00000346569 HTR5AP47898 357 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms