RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 HYLS1Q96M11 299 aa16.44■□□□□ 0.22
HOXA9-201ENST00000343483 FER1L6-AS2Q96M78 137 aa16.44■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF416Q9BWM5 594 aa16.44■□□□□ 0.22
HOXA9-201ENST00000343483 RBM24Q9BX46 236 aaKnown RBP16.44■□□□□ 0.22
HOXA9-201ENST00000343483 BEX1Q9HBH7 125 aa16.44■□□□□ 0.22
HOXA9-201ENST00000343483 MRPS18CQ9Y3D5 142 aaKnown RBP16.44■□□□□ 0.22
HOXA9-201ENST00000343483 CACNA1AO00555 2505 aa16.44■□□□□ 0.22
HOXA9-201ENST00000343483 ANKRD20A5PA0PJZ0 165 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 TTRP02766 147 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 ACSM4P0C7M7 580 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 MSR1P21757 451 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 PRKXP51817 358 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 RAB11BQ15907 218 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 C10orf128Q5T292 105 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 ELMOD2Q8IZ81 293 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 LILRB4Q8NHJ6 448 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 DEDD2Q8WXF8 326 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 ROBO4Q8WZ75 1007 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 PNPLA2Q96AD5 504 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 SF3B5Q9BWJ5 86 aaKnown RBP16.43■□□□□ 0.22
HOXA9-201ENST00000343483 ULBP2Q9BZM5 246 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 B4GALT7Q9UBV7 327 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 ING4Q9UNL4 249 aa16.43■□□□□ 0.22
HOXA9-201ENST00000343483 XRCC3O43542 346 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 PEX14O75381 377 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 ANXA3P12429 323 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 FSTP19883 344 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 PSMB1P20618 241 aaKnown RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 CFPP27918 469 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 GFRA1P56159 465 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 PSMA6P60900 246 aaKnown RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 ELFN2Q5R3F8 820 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 SULF2Q8IWU5 870 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 NELFAQ9H3P2 528 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 FLVCR2Q9UPI3 526 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 HSPB11Q9Y547 144 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 CNTRLQ7Z7A1 2325 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 AKR7A2O43488 359 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 TPPPO94811 219 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 SLC2A1P11166 492 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 CEACAM1P13688 526 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 IGFBP3P17936 291 aaPredicted RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 CXCL3P19876 107 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 POU3F4P49335 361 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 EFNB2P52799 333 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 SNRPD2P62316 118 aaKnown RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 SPOCK1Q08629 439 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 OLFML2AQ68BL7 652 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 LAMTOR1Q6IAA8 161 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 FGD2Q7Z6J4 655 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 LRRC18Q8N456 261 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 OR51A2Q8NGJ7 313 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 ADGRG7Q96K78 797 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 B3GNT4Q9C0J1 378 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 OR10A4Q9H209 315 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF703Q9H7S9 590 aaPredicted RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 PNRC2Q9NPJ4 139 aaKnown RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 FOXD3Q9UJU5 478 aaPredicted RBP16.42■□□□□ 0.22
HOXA9-201ENST00000343483 DOCK10Q96BY6 2186 aa16.42■□□□□ 0.22
HOXA9-201ENST00000343483 FAM166BA8MTA8 275 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 SLC17A2O00624 439 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 DHHO43323 396 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 SYT7O43581 403 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 SSNA1O43805 119 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF780AO75290 641 aaPredicted RBP16.41■□□□□ 0.22
HOXA9-201ENST00000343483 CELA3AP09093 270 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 CLDN15P56746 228 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 LSM6P62312 80 aaKnown RBP16.41■□□□□ 0.22
HOXA9-201ENST00000343483 GLT8D1Q68CQ7 371 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 ANKRD16Q6P6B7 361 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 RHOUQ7L0Q8 258 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 COMMD2Q86X83 199 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 GRPEL2Q8TAA5 225 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 FAM3DQ96BQ1 224 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 MS4A3Q96HJ5 214 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 FLVCR1Q9Y5Y0 555 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 NCKAP5O14513 1909 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 TTLL8A6PVC2 850 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 CTAG2O75638 210 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF121P58317 390 aaPredicted RBP16.41■□□□□ 0.22
HOXA9-201ENST00000343483 GALK2Q01415 458 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 C2orf76Q3KRA6 126 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 C20orf196Q8IYI0 205 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 OR51E1Q8TCB6 317 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 FGGYQ96C11 551 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 DIABLOQ9NR28 239 aa16.41■□□□□ 0.22
HOXA9-201ENST00000343483 CGGBP1Q9UFW8 167 aaPredicted RBP16.41■□□□□ 0.22
HOXA9-201ENST00000343483 LOC100289279A0A1B0GTE1 492 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 GGT3PA6NGU5 568 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF716A6NP11 495 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 SPINK2P20155 84 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 GNALP38405 381 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 CX3CR1P49238 355 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 VEGFCP49767 419 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF84P51523 738 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 ZNF133P52736 654 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-201ENST00000343483 GLYATL3Q5SZD4 288 aa16.4■□□□□ 0.22
HOXA9-201ENST00000343483 FAAP20Q6NZ36 180 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms