RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 EMC4Q5J8M3 183 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SFTPA2Q8IWL1 248 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SFTPA1Q8IWL2 248 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SCAMP4Q969E2 229 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 ACTL6AO96019 429 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 SP1P08047 785 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 CCR6P51684 374 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 DEFB110Q30KQ9 67 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 GLIPR1L1Q6UWM5 242 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 OR51F2Q8NH61 342 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 GPR78Q96P69 363 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 NPY6RQ99463 290 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 SORBS1Q9BX66 1292 aaKnown RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 RNASE1P07998 156 aaKnown RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 FPR3P25089 353 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 GABRG1Q8N1C3 465 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 SLC25A46Q96AG3 418 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 PHYHIPLQ96FC7 376 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 HEPACAM2A8MVW5 462 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 RNF225M0QZC1 329 aaPredicted RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 TBX19O60806 448 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 AQP8O94778 261 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 C1QBP02746 253 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 GLRA1P23415 457 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 MMP11P24347 488 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 CD40P25942 277 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 TBC1D26Q86UD7 250 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 IL17FQ96PD4 163 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 GDF2Q9UK05 429 aaPredicted RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 M0QYG6 137 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 HRASP01112 189 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 METAP1P53582 386 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 SHISA6Q6ZSJ9 500 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 ZNF519Q8TB69 540 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 ATP23Q9Y6H3 246 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 NME4O00746 187 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 CD37P11049 281 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 AGBL5Q8NDL9 886 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 OR51S1Q8NGJ8 323 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 RAB24Q969Q5 203 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 APOBEC3GQ9HC16 384 aaKnown RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 AMMECR1Q9Y4X0 333 aaPredicted RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 OR8G3PP0DMU2 310 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 OR1D5P58170 312 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 FAM3AP98173 230 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 SLC10A2Q12908 348 aaPredicted RBP16.15■□□□□ 0.18
SMAD4-201ENST00000342988 TMIGD2Q96BF3 282 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 CACNG4Q9UBN1 327 aa16.15■□□□□ 0.18
SMAD4-201ENST00000342988 CDC14CA4D256 554 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 MMP26Q9NRE1 261 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 RPA2P15927 270 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 TGIF2LYQ8IUE0 185 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 SLC25A43Q8WUT9 341 aaPredicted RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 SLC35B4Q969S0 331 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PACRGQ96M98 296 aaPredicted RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 DCBLD2Q96PD2 775 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 CDCA3Q99618 268 aaPredicted RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 NPTNQ9Y639 398 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 TRDV1A0A1B0GX56 115 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 DDOSTP39656 456 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 CYB561P49447 251 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 ANKRD16Q6P6B7 361 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 IP6K3Q96PC2 410 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 RXFP4Q8TDU9 374 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 CCL5P13501 91 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PPP1CCP36873 323 aaKnown RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 TBPL2Q6SJ96 375 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PLPP7Q8NBV4 271 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 ZFPM2Q8WW38 1151 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 HSPB2A8KAH6 182 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PTHLHP12272 177 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 OPRK1P41145 380 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 HSPB2Q16082 182 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 IGFBP7Q16270 282 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 PARS2Q7L3T8 475 aaKnown RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 COL25A1Q9BXS0 654 aaPredicted RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 SLC25A5P05141 298 aaKnown RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 HMGN2P05204 90 aaKnown RBP16.14■□□□□ 0.17
SMAD4-201ENST00000342988 EMP1P54849 157 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 OLIG2Q13516 323 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 HLA-BQ31612 363 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 ARFGAP1Q8N6T3 406 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.17
SMAD4-201ENST00000342988 BMP1P13497 986 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 NQO2P16083 231 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 DNAJC15Q9Y5T4 150 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 SLIT3O75094 1523 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 A0A1W2PNV4 684 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 F7P08709 466 aaPredicted RBP16.13■□□□□ 0.17
SMAD4-201ENST00000342988 FGF2P09038 288 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 SIGLEC10Q96LC7 697 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 GPA33Q99795 319 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 UBE2ZQ9H832 354 aaPredicted RBP16.13■□□□□ 0.17
SMAD4-201ENST00000342988 GPR75O95800 540 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 ATRXP46100 2492 aa16.13■□□□□ 0.17
SMAD4-201ENST00000342988 MEIKINA0A087WXM9 373 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms