RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
PKN1-202ENST00000342216 SLC48A1Q6P1K1 146 aa13.47□□□□□ -0.25
PKN1-202ENST00000342216 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
PKN1-202ENST00000342216 LRFN5Q96NI6 719 aa13.47□□□□□ -0.25
PKN1-202ENST00000342216 TAS2R4Q9NYW5 299 aa13.47□□□□□ -0.25
PKN1-202ENST00000342216 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
PKN1-202ENST00000342216 CST4P01036 141 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.25
PKN1-202ENST00000342216 MAP3K8P41279 467 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 GABRA4P48169 554 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 SLC10A1Q14973 349 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 FCRL6Q6DN72 434 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 CLEC18BQ6UXF7 455 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 ZNF101Q8IZC7 436 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 MOGAT1Q96PD6 335 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 OR2M4Q96R27 311 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 WDR76Q9H967 626 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 TM7SF3Q9NS93 570 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 LAMP5Q9UJQ1 280 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 RAB22AQ9UL26 194 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 KCNK6Q9Y257 313 aa13.46□□□□□ -0.25
PKN1-202ENST00000342216 RAB27BO00194 218 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 ABHD16AO95870 558 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 MAS1LP35410 378 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 TMEM33P57088 247 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 HNRNPKP61978 463 aaKnown RBP eCLIP13.46□□□□□ -0.264e-6■■■■□ 21.7
PKN1-202ENST00000342216 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.26
PKN1-202ENST00000342216 EIF5AP63241 154 aaKnown RBP13.46□□□□□ -0.26
PKN1-202ENST00000342216 CSNK1G2P78368 415 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 SPEM2Q0P670 501 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 DUSP8Q13202 625 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.26
PKN1-202ENST00000342216 VITQ6UXI7 678 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 ZDHHC22Q8N966 263 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 MCHR2Q969V1 340 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 ERGIC1Q969X5 290 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 MRGPRX3Q96LB0 322 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 SH3BGRL3Q9H299 93 aa13.46□□□□□ -0.26
PKN1-202ENST00000342216 ELOA3CA0A087WX78 387 aaPredicted RBP13.45□□□□□ -0.26
PKN1-202ENST00000342216 H3BQ15 152 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 TMEM127O75204 238 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 NID1P14543 1247 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 RPL12P30050 165 aaKnown RBP13.45□□□□□ -0.26
PKN1-202ENST00000342216 RGS19P49795 217 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 UBE2KP61086 200 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 HAGHQ16775 308 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
PKN1-202ENST00000342216 DMRTA1Q5VZB9 504 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 MTSS1LQ765P7 747 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 OR2I1PQ8NGU4 316 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 CDC6Q99741 560 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 RFNGQ9Y644 331 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 DLEU1O43261 78 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 SCGB1D2O95969 90 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 RAB4AP20338 218 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 CEACAM6P40199 344 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 TRA2AQ13595 282 aaKnown RBP eCLIP13.45□□□□□ -0.26
PKN1-202ENST00000342216 ISXQ2M1V0 245 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 MED25Q71SY5 747 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 CXorf40AQ8TE69 158 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 MENTQ9BUN1 341 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 LMAN2LQ9H0V9 348 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 WNT5BQ9H1J7 359 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 CES1P1Q9UKY3 287 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 ENTPD2Q9Y5L3 495 aa13.45□□□□□ -0.26
PKN1-202ENST00000342216 TIMP2P16035 220 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 GNB3P16520 340 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 BCL6P41182 706 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
PKN1-202ENST00000342216 ZNF595Q8IYB9 648 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 C17orf78Q8N4C9 275 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 TMEM230Q96A57 120 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 TPSD1Q9BZJ3 242 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 LSM5Q9Y4Y9 91 aaKnown RBP13.44□□□□□ -0.26
PKN1-202ENST00000342216 FANCMQ8IYD8 2048 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 IGKV1-8A0A0C4DH67 115 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 K7EPK0 472 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
PKN1-202ENST00000342216 PGA3P0DJD8 388 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 THBS4P35443 961 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 DMWDQ09019 674 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 ARHGAP11BQ3KRB8 267 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 DCST2Q5T1A1 773 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 MDGA2Q7Z553 956 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 ZNF619Q8N2I2 560 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 LYPD6BQ8NI32 183 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 M1APQ8TC57 530 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 ZNF681Q96N22 645 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 FAM83CQ9BQN1 747 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 C19orf12Q9NSK7 152 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
PKN1-202ENST00000342216 GRXCR1A8MXD5 290 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms