RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PROB1E7EW31 1015 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 SULT1C2O00338 296 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 NOS1APO75052 506 aaPredicted RBP13.3□□□□□ -0.28
TPM3-208ENST00000341485 OR2A4O95047 310 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 TTRP02766 147 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 RLN1P04808 185 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 ZNF24P17028 368 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 GPR85P60893 370 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 ACER2Q5QJU3 275 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 H3F3CQ6NXT2 135 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 STEAP1BQ6NZ63 245 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 NOXO1Q8NFA2 376 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 OR4D6Q8NGJ1 314 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 ADAMTS17Q8TE56 1095 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 FGGYQ96C11 551 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 OR2A7Q96R45 310 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 ANGPTL4Q9BY76 406 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 PCSK5Q92824 1860 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 LPLP06858 475 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 PGA4P0DJD7 388 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 PGA3P0DJD8 388 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 OR3A3P47888 321 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 DHODHQ02127 395 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 PMPCAQ10713 525 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 MOGAT2Q3SYC2 334 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 THEM4Q5T1C6 240 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 JMJD6Q6NYC1 403 aaPredicted RBP13.3□□□□□ -0.28
TPM3-208ENST00000341485 ELMOD2Q8IZ81 293 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 NKAIN3Q8N8D7 197 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 WDSUB1Q8N9V3 476 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 SGCZQ96LD1 299 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 JSRP1Q96MG2 331 aaPredicted RBP13.3□□□□□ -0.28
TPM3-208ENST00000341485 OR5B2Q96R09 309 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 PBOV1Q9GZY1 135 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 LEUTXA8MZ59 168 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 G3V3Y1 287 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 TRAF3IP2O43734 574 aaPredicted RBP13.29□□□□□ -0.28
TPM3-208ENST00000341485 P04436 131 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 CLRN1P58418 232 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 ACTBP60709 375 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 RAP2BP61225 183 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 ACTG1P63261 375 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 IKZF1Q13422 519 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 C2orf68Q2NKX9 166 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 ZNF468Q5VIY5 522 aaPredicted RBP13.29□□□□□ -0.28
TPM3-208ENST00000341485 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 OR8H3Q8N146 312 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 FADS6Q8N9I5 356 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 C1orf198Q9H425 327 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 GDF2Q9UK05 429 aaPredicted RBP13.29□□□□□ -0.28
TPM3-208ENST00000341485 LHFPL6Q9Y693 200 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 KNTC1P50748 2209 aa13.29□□□□□ -0.28
TPM3-208ENST00000341485 TM4SF5O14894 197 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 RAMP1O60894 148 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 IGHG1P01857 330 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 KLK2P20151 261 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 ITGA3P26006 1051 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 TAS2R19P59542 299 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 OC90Q02509 493 aaPredicted RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 MFAP5Q13361 173 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 EXOSC2Q13868 293 aaKnown RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 TGIF1Q15583 401 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 DCAF10Q5QP82 559 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 ZNF813Q6ZN06 617 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 GPAT4Q86UL3 456 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 DTX1Q86Y01 620 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 BEST3Q8N1M1 668 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 FAM109AQ8N4B1 249 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 ADAT3Q96EY9 351 aaPredicted RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 FER1L6-AS2Q96M78 137 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 CHST6Q9GZX3 395 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 SCPEP1Q9HB40 452 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 SH2D2AQ9NP31 389 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 PLSCR5A0PG75 271 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 UBE2QL1A1L167 161 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 LINC00862A6NCI5 91 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 CFDP00746 253 aaPredicted RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 BDKRB2P30411 391 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 CDAP32320 146 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 SFTPDP35247 375 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 CYB561P49447 251 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 AIMP2Q13155 320 aaKnown RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 GRK1Q15835 563 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 SLC25A47Q6Q0C1 308 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 GALNT16Q8N428 558 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 UXS1Q8NBZ7 420 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 OR1J2Q8NGS2 313 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 PTX4Q96A99 478 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 FOXRED1Q96CU9 486 aaPredicted RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 CNTD2Q9H8S5 307 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 ZMAT3Q9HA38 289 aaKnown RBP13.28□□□□□ -0.28
TPM3-208ENST00000341485 ASCL3Q9NQ33 180 aa13.28□□□□□ -0.28
TPM3-208ENST00000341485 ABI3Q9P2A4 366 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms