RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KCNJ15Q99712 375 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 YIPF3Q9GZM5 350 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 TREM2Q9NZC2 230 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 PMF1-BGLAPU3KQ54 211 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 ACANP16112 2415 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 LYNX1G3V0Z9 82 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 M0R233 179 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 WBP4O75554 376 aaKnown RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 LYNX1P0DP58 116 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 DBTP11182 482 aaKnown RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 SELENOVP59797 346 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 GRB2P62993 217 aaKnown RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 PSG7Q13046 419 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 Q5PR19 223 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 WFDC11Q8NEX6 87 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 NINJ1Q92982 152 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 DVL3Q92997 716 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 PPP1R14AQ96A00 147 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 APOBEC3DQ96AK3 386 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-202ENST00000340993 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 DOK1Q99704 481 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
TUBD1-202ENST00000340993 OVOL3O00110 214 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
TUBD1-202ENST00000340993 LILRA1O75019 489 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF92Q03936 586 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 MFGE8Q08431 387 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-202ENST00000340993 OCLNQ16625 522 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 TP53I3Q53FA7 332 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 UNQ6126/PRO20091Q6UXV3 157 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 COMMD2Q86X83 199 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 C8orf59Q8N0T1 100 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-202ENST00000340993 YIPF7Q8N8F6 280 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 IGFBPL1Q8WX77 278 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 LGALS12Q96DT0 336 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 TRMT61AQ96FX7 289 aaKnown RBP11.3□□□□□ -0.6
TUBD1-202ENST00000340993 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 MROQ9BYG7 248 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 C8orf4Q9NR00 106 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 BEX4Q9NWD9 120 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF319Q9P2F9 582 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 GNG8Q9UK08 70 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 MYRFQ9Y2G1 1151 aa11.3□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF250P15622 560 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 PSMB10P40306 273 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 MAGEB1P43366 347 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 CCL8P80075 99 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
TUBD1-202ENST00000340993 EFNB3Q15768 340 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 MEDAGQ5VYS4 303 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 MRPL21Q7Z2W9 205 aaKnown RBP11.29□□□□□ -0.6
TUBD1-202ENST00000340993 LHFPL3Q86UP9 236 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 OR10AD1Q8NGE0 317 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 OR8B4Q96RC9 309 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 SOX7Q9BT81 388 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
TUBD1-202ENST00000340993 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 ZANQ9Y493 2812 aa11.29□□□□□ -0.6
TUBD1-202ENST00000340993 PLSCR5A0PG75 271 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 ZSCAN5BA6NJL1 495 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 XPNPEP2O43895 674 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 MPZL2O60487 215 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 CDC14BO60729 498 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 BMP4P12644 408 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 RGS6P49758 472 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF85Q03923 595 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 MALLQ13021 153 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 KCTD18Q6PI47 426 aaPredicted RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 DRAM2Q6UX65 266 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 PGAP1Q75T13 922 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 SETD9Q8NE22 299 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 Q96MF0 132 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 Q96MT0 163 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 DCLRE1CQ96SD1 692 aaKnown RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 PURGQ9UJV8 347 aaKnown RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TMEM14AQ9Y6G1 99 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TMEM269A0A1B0GVZ9 245 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TRIM64A6NGJ6 449 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 TRIM64BA6NI03 449 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 NCR1O76036 304 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
TUBD1-202ENST00000340993 ZNF81P51508 661 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 ISL1P61371 349 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 POU4F2Q12837 409 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 RIPK1Q13546 671 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 SPRNQ5BIV9 151 aa11.28□□□□□ -0.6
TUBD1-202ENST00000340993 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms