RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SHISA3A0PJX4 238 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 SYT7O43581 403 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 SYNGR3O43761 229 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 SLC19A2O60779 497 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 ISG15P05161 165 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 ITGA5P08648 1049 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 DBHP09172 617 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 ARR3P36575 388 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 GUSBP1Q15486 140 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 MOGQ16653 247 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 Q6ZT83 130 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 ZNF627Q7L945 461 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 ORAI1Q96D31 301 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 WNT5BQ9H1J7 359 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 PEX16Q9Y5Y5 336 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 A3GALT2U3KPV4 340 aa15.16■□□□□ 0.02
CLDN4-201ENST00000340958 GCN1Q92616 2671 aaKnown RBP15.16■□□□□ 0.02
CLDN4-201ENST00000340958 HELZ2Q9BYK8 2649 aaKnown RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 hCG_2014768A0A024R1R8 64 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 OR6C6A6NF89 314 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 RAD51DO75771 328 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 UBL3O95164 117 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 CNOT4O95628 575 aaKnown RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 IL18BPO95998 194 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 TTRP02766 147 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 RAF1P04049 648 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 CRHP06850 196 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 CTSSP25774 331 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 HOXC12P31275 282 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 UBE2NP61088 152 aaKnown RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 PLP2Q04941 152 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 HIKESHIQ53FT3 197 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 IDNKQ5T6J7 187 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 Q6ZNX1 250 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 SEM1Q6ZVN7 128 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 BTLAQ7Z6A9 289 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 ZNF433Q8N7K0 673 aaPredicted RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 OR8B12Q8NGG6 310 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 OR6Q1Q8NGQ2 317 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 OR51E1Q8TCB6 317 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 LYZL6O75951 148 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 MMP7P09237 267 aaPredicted RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 INHBBP09529 407 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 ACSM4P0C7M7 580 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 PLA2G2AP14555 144 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 CCNOP22674 350 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 IGHV1-2P23083 117 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 TIMP3P35625 211 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 RAB1AP62820 205 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 TLE1Q04724 770 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 DPPA2Q7Z7J5 298 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 DOLPP1Q86YN1 238 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 RPRMLQ8N4K4 120 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 ZFP3Q96NJ6 502 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 SP140LQ9H930 580 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 SMURF1Q9HCE7 757 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 PLSCR4Q9NRQ2 329 aa15.15■□□□□ 0.02
CLDN4-201ENST00000340958 AK6Q9Y3D8 172 aaKnown RBP15.15■□□□□ 0.02
CLDN4-201ENST00000340958 MED12LQ86YW9 2145 aa15.14■□□□□ 0.02
CLDN4-201ENST00000340958 RELNP78509 3460 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 PIN1P1O15428 100 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 MAS1P04201 325 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 OR10A3P58181 314 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 SFRP5Q5T4F7 317 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 DRAM2Q6UX65 266 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 NAA40Q86UY6 237 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 ASB5Q8WWX0 329 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 FAM210AQ96ND0 272 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 NXF2Q9GZY0 626 aaKnown RBP15.14■□□□□ 0.01
CLDN4-201ENST00000340958 OPN3Q9H1Y3 402 aaPredicted RBP15.14■□□□□ 0.01
CLDN4-201ENST00000340958 OR10A2Q9H208 303 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 TBCCD1Q9NVR7 557 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 SHANK1Q9Y566 2161 aa15.14■□□□□ 0.01
CLDN4-201ENST00000340958 A0A075B6Q4 140 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 IQCMA0A1B0GVH7 501 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ANKRD61A6NGH8 418 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 PYCARD-AS1I3L0S3 204 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 TNFSF13O75888 250 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 TOXO94900 526 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 LCATP04180 440 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 CFL1P23528 166 aaKnown RBP15.13■□□□□ 0.01
CLDN4-201ENST00000340958 GNALP38405 381 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 GSG1Q2KHT4 349 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 TBRG1Q3YBR2 411 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 MZT2AQ6P582 158 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF610Q8N9Z0 462 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 OR52H1Q8NGJ2 320 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 S100ZQ8WXG8 99 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 BCL2L2Q92843 193 aaPredicted RBP15.13■□□□□ 0.01
CLDN4-201ENST00000340958 STARD4Q96DR4 205 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 FAM71F1Q96KD3 344 aaPredicted RBP15.13■□□□□ 0.01
CLDN4-201ENST00000340958 GPR84Q9NQS5 396 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 FAIMQ9NVQ4 179 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 PLEKHB1Q9UF11 243 aaPredicted RBP15.13■□□□□ 0.01
CLDN4-201ENST00000340958 DAPK2Q9UIK4 370 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 TINAGQ9UJW2 476 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ARPC4-TTLL3A0A0A6YYG9 625 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ANXA2P2A6NMY6 339 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 EDN3P14138 238 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF20P17024 532 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms