RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRIP10Q15642 601 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 LRRC36Q1X8D7 754 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 RHOUQ7L0Q8 258 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF283Q8N7M2 679 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 UBASH3BQ8TF42 649 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 CNN2Q99439 309 aaKnown RBP13□□□□□ -0.33
UBE3B-201ENST00000340074 REG4Q9BYZ8 158 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 MSL2Q9HCI7 577 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
UBE3B-201ENST00000340074 CYSLTR2Q9NS75 346 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 IMPAD1Q9NX62 359 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 DNAJC27Q9NZQ0 273 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 CGGBP1Q9UFW8 167 aaPredicted RBP13□□□□□ -0.33
UBE3B-201ENST00000340074 LAMP5Q9UJQ1 280 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 N6AMT1Q9Y5N5 214 aa13□□□□□ -0.33
UBE3B-201ENST00000340074 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 C5orf63A6NC05 138 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 LYNX1G3V0Z9 82 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 SPRY3O43610 288 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 IGHV1-46P01743 117 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 INHBBP09529 407 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 LYNX1P0DP58 116 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 FOSL1P15407 271 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 LIPAP38571 399 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 PRSS12P56730 875 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 CCL8P80075 99 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 GK2Q14410 553 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-201ENST00000340074 TSTQ16762 297 aaKnown RBP12.99□□□□□ -0.33
UBE3B-201ENST00000340074 PCGF3Q3KNV8 242 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 OR2T2Q6IF00 324 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 LRRN1Q6UXK5 716 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 OR5AS1Q8N127 324 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 MAPK1IP1LQ8NDC0 245 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-201ENST00000340074 ADGRL4Q9HBW9 690 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 HAO2Q9NYQ3 351 aa12.99□□□□□ -0.33
UBE3B-201ENST00000340074 ANXA2P07355 339 aaKnown RBP12.98□□□□□ -0.33
UBE3B-201ENST00000340074 HTR1FP30939 366 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 ELF3P78545 371 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-201ENST00000340074 MALLQ13021 153 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 GLYATL3Q5SZD4 288 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 PGAP1Q75T13 922 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 GALNT4Q8N4A0 578 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 OR2AE1Q8NHA4 323 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 SMR3AQ99954 134 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 DECR2Q9NUI1 292 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 NKIRAS2Q9NYR9 191 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
UBE3B-201ENST00000340074 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 COPS3Q9UNS2 423 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
UBE3B-201ENST00000340074 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 NDUFS8O00217 210 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 PSMD9O00233 223 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 DLGAP1O14490 977 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 TPD52L2O43399 206 aaKnown RBP12.97□□□□□ -0.33
UBE3B-201ENST00000340074 SLC25A16P16260 332 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 COL8A2P25067 703 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 PEX2P28328 305 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF121P58317 390 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-201ENST00000340074 ZNF92Q03936 586 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 ZMAT1Q5H9K5 638 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 Q6ZR03 302 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 USP51Q70EK9 711 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 PRSS45Q7RTY3 260 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 MRPL21Q7Z2W9 205 aaKnown RBP12.97□□□□□ -0.33
UBE3B-201ENST00000340074 KRT77Q7Z794 578 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 RFLNBQ8N5W9 214 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 BHLHE23Q8NDY6 225 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 OR51G2Q8NGK0 314 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 YIPF5Q969M3 257 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 PIMREGQ9BSJ6 248 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 TTTY10Q9BZA0 68 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 BRD7Q9NPI1 651 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 FAM118AQ9NWS6 357 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 SMPD3Q9NY59 655 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-201ENST00000340074 AASSQ9UDR5 926 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 TMEM14AQ9Y6G1 99 aa12.97□□□□□ -0.33
UBE3B-201ENST00000340074 IQCF6A8MYZ5 107 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 PRR32B1ATL7 298 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 VWC2LB2RUY7 222 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 TBX1O43435 398 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 CDC14BO60729 498 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 LILRA1O75019 489 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 APOL3O95236 402 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 APOC1P02654 83 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 SBK2P0C263 348 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
UBE3B-201ENST00000340074 FAM209AQ5JX71 171 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 KCTD18Q6PI47 426 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms