RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 HSH2DQ96JZ2 352 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MRGPRX4Q96LA9 322 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF300Q96RE9 604 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 MCHR1Q99705 422 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 P2RY12Q9H244 342 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MS4A5Q9H3V2 200 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TUBA4BQ9H853 241 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SIDT1Q9NXL6 827 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 DNAJB12Q9NXW2 375 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 METRNQ9UJH8 293 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NEUROG3Q9Y4Z2 214 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HSBP1O75506 76 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PNPP00491 289 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CST3P01034 146 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 MAS1P04201 325 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 RPL7P18124 248 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 TBXA2RP21731 343 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 FABP6P51161 128 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 UBE2KP61086 200 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ERHP84090 104 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 SHC2P98077 582 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF345Q14585 488 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR51A7Q8NH64 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR2AE1Q8NHA4 323 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZIC5Q96T25 663 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF426Q9BUY5 554 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF768Q9H5H4 540 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 OR5AC2Q9NZP5 309 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 B3GALT5Q9Y2C3 310 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NFS1Q9Y697 457 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 RGS13O14921 159 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 EREGO14944 169 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TTRP02766 147 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HSPB1P04792 205 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 SERPINA2P20848 420 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ACKR3P25106 362 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 BIDP55957 195 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 UBE2G1P62253 170 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 POLR2GP62487 172 aaKnown RBP eCLIP3□□□□□ -1.93
CSMD3-202ENST00000339701 SIRPAP78324 504 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NTHL1P78549 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 C17orf67Q0P5P2 114 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 BNIP3Q12983 259 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 GALNT5Q7Z7M9 940 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM25Q86YD3 366 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF573Q86YE8 665 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 C11orf40Q8WZ69 217 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM56Q96MV1 263 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 VPS25Q9BRG1 176 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 THAP7Q9BT49 309 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 DUSP15Q9H1R2 295 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 TP63Q9H3D4 680 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 EXOSC3Q9NQT5 275 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 YAE1D1Q9NRH1 226 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZDHHC18Q9NUE0 388 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TXNL4BQ9NX01 149 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ERVK13-1Q9NX77 482 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 AJAP1Q9UKB5 411 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 PITPNC1Q9UKF7 332 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 LOC102724200A0A096LPH7 203 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 LGALS8O00214 317 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PDGFBP01127 241 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ATP1B1P05026 303 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 H2AFB1P0C5Y9 115 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 THBS4P35443 961 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CEACAM3P40198 252 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CCR2P41597 374 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SLC6A12P48065 614 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CLDN15P56746 228 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CD83Q01151 205 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MRPL58Q14197 206 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 GPR19Q15760 415 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 DEFB121Q5J5C9 76 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM71Q6P5X7 295 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SBSNQ6UWP8 590 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZG16BQ96DA0 208 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ACY3Q96HD9 319 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SLC35E1Q96K37 410 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NXF5Q9H1B4 397 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 C1RLQ9NZP8 487 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 USP22Q9UPT9 525 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PPP1R3CQ9UQK1 317 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1B0GTQ1 180 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 C13orf42A0A1B0GVH6 325 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1W2PQL4 384 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 CLDN34H7C241 214 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ACOT8O14734 319 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CHST1O43916 411 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CYTIPO60759 359 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NUDT3O95989 172 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 IGF2P01344 180 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 AMY2AP04746 511 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CD96P40200 585 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR1D5P58170 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 C9orf135Q5VTT2 229 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR10K2Q6IF99 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TMPRSS7Q7RTY8 843 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ANGPTL5Q86XS5 388 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZDHHC22Q8N966 263 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 C1orf127Q8N9H9 656 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms