RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 BEX1Q9HBH7 125 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 BOKQ9UMX3 212 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CAMK2AQ9UQM7 478 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PTPRBP23467 1997 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM272A0A1B0GTI8 110 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 HSPB2A8KAH6 182 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 MSR1P21757 451 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC6A1P30531 599 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 GDNFP39905 211 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC6A9P48067 706 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 ART1P52961 327 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PLGLB1Q02325 96 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 HSPB2Q16082 182 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SNAI3Q3KNW1 292 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM69Q5SWH9 247 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 C10orf128Q5T292 105 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TSPO2Q5TGU0 170 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SFRP4Q6FHJ7 346 aaPredicted RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PLET1Q6UQ28 207 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF813Q6ZN06 617 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 AAED1Q7RTV5 226 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TUSC5Q8IXB3 177 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TOMM5Q8N4H5 51 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 MDS2Q8NDY4 140 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 OR13C9Q8NGT0 318 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 AKR7LQ8NHP1 331 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 KCNE4Q8WWG9 221 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 HAVCR1Q96D42 359 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 S100A16Q96FQ6 103 aaKnown RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 DMRTB1Q96MA1 342 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 LRFN3Q9BTN0 628 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CNTD2Q9H8S5 307 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 KALRNO60229 2985 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 GJE1A6NN92 205 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC17A2O00624 439 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CTAG2O75638 210 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CCNKO75909 580 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CD2P06729 351 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 VAMP1P23763 118 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 DCTDP32321 178 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CASRP41180 1078 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 GUCA1AP43080 201 aaPredicted RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 NR4A2P43354 598 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PPIAP62937 165 aaKnown RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 KCNMB1Q16558 191 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CEACAM16Q2WEN9 425 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PLA1AQ53H76 456 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM244Q5VVB8 128 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC25A25Q6KCM7 469 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF774Q6NX45 483 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF704Q6ZNC4 412 aaPredicted RBP6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 OR6F1Q8NGZ6 308 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 OR2AE1Q8NHA4 323 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 NPRL2Q8WTW4 380 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 MS4A3Q96HJ5 214 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 FER1L6-AS2Q96M78 137 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CALHM2Q9HA72 323 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 PLEK2Q9NYT0 353 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 FLVCR2Q9UPI3 526 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 RCE1Q9Y256 329 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 RHBDD3Q9Y3P4 386 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 CACNG2Q9Y698 323 aa6.5□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A096LPE4 126 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A1W2PPZ6 126 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 WIPF3A6NGB9 483 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 HPNP05981 417 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 CALCBP10092 127 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 ACHEP22303 614 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 HTR2CP28335 458 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 NOVA1P51513 510 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 TAS2R20P59543 309 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 PSMA6P60900 246 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 ARG2P78540 354 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 AKAP14Q86UN6 197 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 BEST4Q8NFU0 473 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 OR4D10Q8NGI6 311 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 SMIM4Q8WVI0 70 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 CMBLQ96DG6 245 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM122AQ96E09 287 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 ST6GAL2Q96JF0 529 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 DLL3Q9NYJ7 618 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 NKIRAS2Q9NYR9 191 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 ALG5Q9Y673 324 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 TRAV18A0A075B6X5 111 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 IGKV1-9A0A0C4DH69 117 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A1W2PP11 408 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 CIB4A0PJX0 185 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 EFSO43281 561 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 CYTIPO60759 359 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 GLSO94925 669 aaPredicted RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 UBCP0CG48 685 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 ARSBP15848 533 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 LSM6P62312 80 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 RAB11BQ15907 218 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms