RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FAM107BQ9H098 131 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 HDHD2Q9H0R4 259 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 PRDM13Q9H4Q3 707 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 WDR76Q9H967 626 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 BEX1Q9HBH7 125 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 SPAG4Q9NPE6 437 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 VSX1Q9NZR4 365 aaPredicted RBP13.03□□□□□ -0.32
LINC01116-202ENST00000339037 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 SIGLEC7Q9Y286 467 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 TRBV4-1A0A0J9YWV2 114 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 IMPA2O14732 288 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 NDUFB2O95178 105 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 CRYBA1P05813 215 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 SELEP16581 610 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 FPR3P25089 353 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 GATA4P43694 442 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 OMPP47874 163 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 FXYD6P3P58550 94 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 BPIFB3P59826 476 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 DGCR6Q14129 220 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 WDR25Q64LD2 544 aaPredicted RBP13.02□□□□□ -0.33
LINC01116-202ENST00000339037 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 GJC3Q8NFK1 279 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 GPX7Q96SL4 187 aaPredicted RBP13.02□□□□□ -0.33
LINC01116-202ENST00000339037 COQ7Q99807 217 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 HCAR1Q9BXC0 346 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 NUAK2Q9H093 628 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 MARCH7Q9H992 704 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 NOX4Q9NPH5 578 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 NRIP3Q9NQ35 241 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 DCAF13Q9NV06 445 aaKnown RBP13.02□□□□□ -0.33
LINC01116-202ENST00000339037 TMEM100Q9NV29 134 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 ADA2Q9NZK5 511 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 V9GYQ6 96 aa13.02□□□□□ -0.33
LINC01116-202ENST00000339037 A0A1B0GWJ7 208 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 C22orf46C9J442 243 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 SOCS2O14508 198 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 ENSAO43768 121 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PTP4A3O75365 173 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 RHCEP18577 417 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PRDX6P30041 224 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PMELP40967 661 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 CENPAP49450 140 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 SRSF4Q08170 494 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 KCNMB1Q16558 191 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PGM2L1Q6PCE3 622 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 FIP1L1Q6UN15 594 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PTCHD4Q6ZW05 846 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 RSRC1Q96IZ7 334 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PCGF1Q9BSM1 259 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 PDP1Q9P0J1 537 aaPredicted RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 KIF17Q9P2E2 1029 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 SAMD4AQ9UPU9 718 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 FAM32AQ9Y421 112 aaKnown RBP13.01□□□□□ -0.33
LINC01116-202ENST00000339037 LHFPL6Q9Y693 200 aa13.01□□□□□ -0.33
LINC01116-202ENST00000339037 SNX3O60493 162 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 CRABP1P29762 137 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 HIST1H3AP68431 136 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 MEP1BQ16820 701 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
LINC01116-202ENST00000339037 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 OLFML2AQ68BL7 652 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 DNM1P34Q6PK57 102 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 CORO6Q6QEF8 472 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 Q6YL49 198 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 HIST2H3AQ71DI3 136 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 TMEM86BQ8N661 226 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 CELF2-AS1Q8N7Q2 184 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 OR11L1Q8NGX0 322 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 OR52J3Q8NH60 311 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 Q8TCH9 128 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 ERGIC1Q969X5 290 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 DHRS1Q96LJ7 313 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 TSSK2Q96PF2 358 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 TECTBQ96PL2 329 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 CCT8L2Q96SF2 557 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 FUZQ9BT04 418 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 CHIAQ9BZP6 476 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
LINC01116-202ENST00000339037 C1RLQ9NZP8 487 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 IER3IP1Q9Y5U9 82 aa13□□□□□ -0.33
LINC01116-202ENST00000339037 A0A0G2JK05 382 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 M0QZ24 198 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 NDUFA7O95182 113 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 SEMG1P04279 462 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 PSMB10P40306 273 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 NPY4RP50391 375 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 COX10Q12887 443 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 GK2Q14410 553 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms