RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CPEB3Q8NE35 698 aaKnown RBP5.65□□□□□ -1.51
PRKDC-202ENST00000338368 CCDC163A0A0D9SF12 145 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 ARGFXA6NJG6 315 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 POU4F3Q15319 338 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 SCPEP1Q9HB40 452 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 GPR84Q9NQS5 396 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 TNFSF15O95150 251 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 BGLAPP02818 100 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 MEX3BQ6ZN04 569 aaKnown RBP5.65□□□□□ -1.51
PRKDC-202ENST00000338368 CNEP1R1Q8N9A8 125 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF175Q9Y473 711 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 TMEM235A6NFC5 223 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 HOXB5P09067 269 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 IL32P24001 234 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 DCTDP32321 178 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 OR2Y1Q8NGV0 311 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 APOBEC4Q8WW27 367 aaKnown RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 GDF2Q9UK05 429 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 KLF13Q9Y2Y9 288 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 MT-CO3P00414 261 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 RPS4Y1P22090 263 aaKnown RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PPA1Q15181 289 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ELP2Q6IA86 826 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 GCH1P30793 250 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PCK2Q16822 640 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 LILRB4Q8NHJ6 448 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 OR51B6Q9H340 312 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 KCNIP1Q9NZI2 227 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 SF3B6Q9Y3B4 125 aaKnown RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CCDC187A0A096LP49 1063 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ECH1Q13011 328 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ACER2Q5QJU3 275 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PMS2CLQ68D20 193 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CCDC71LQ8N9Z2 235 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 GPR173Q9NS66 373 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 FOXJ3Q9UPW0 622 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 TNFSF11O14788 317 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 RER1O15258 196 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ABOP16442 354 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF79Q15937 498 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ARSKQ6UWY0 536 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 GTPBP8Q8N3Z3 284 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 NUDCD2Q8WVJ2 157 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 APH1AQ96BI3 265 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PTPRFP10586 1907 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 COL6A6A6NMZ7 2263 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CEBPGP53567 150 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 OR10AC1Q8NH08 325 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ZFAND1Q8TCF1 268 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 IL1F10Q8WWZ1 152 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 DEFB127Q9H1M4 99 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PIGLQ9Y2B2 252 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 R4GN57 208 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 A0A0A6YYH2 397 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 A0A0A6YYJ9 748 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 A6NJ64 397 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 TRAPPC2LH3BP13 241 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 SERPINA7P05543 415 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 RPS18P62269 152 aaKnown RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 MDGA2Q7Z553 956 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 DDOQ99489 341 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ZCCHC4Q9H5U6 513 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 TMEM9BQ9NQ34 198 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PMS2P2O95744 297 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 FZD5Q13467 585 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 SLC9A3R2Q15599 337 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 BEND4Q6ZU67 534 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF695Q8IW36 515 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PRR18Q8N4B5 295 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF436Q9C0F3 470 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PTPRDP23468 1912 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 OR2M5A3KFT3 312 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 SLC34A2O95436 690 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CMTM1Q8IZ96 169 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 NCKAP5O14513 1909 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 SIX6O95475 246 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 NFYAP23511 347 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CD300CQ08708 224 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 RHOUQ7L0Q8 258 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 MRGPREQ86SM8 312 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 FJX1Q86VR8 437 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CMTM3Q96MX0 182 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 PLA2G3Q9NZ20 509 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 CACNA1BQ00975 2339 aa5.64□□□□□ -1.51
PRKDC-202ENST00000338368 OR4C45A6NMZ5 311 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF780AO75290 641 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 DXOO77932 396 aaKnown RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 IGLV3-19P01714 112 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 RAD52P43351 418 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 ZNF121P58317 390 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 BOLLQ8N9W6 283 aaKnown RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 RRNAD1Q96FB5 475 aaKnown RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 MICU1Q9BPX6 476 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 NXF2Q9GZY0 626 aaKnown RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 FRRS1LQ9P0K9 344 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 B3GALT1Q9Y5Z6 326 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 CCSO14618 274 aa5.63□□□□□ -1.51
PRKDC-202ENST00000338368 GLSO94925 669 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-202ENST00000338368 LINC00303Q3SY05 128 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms