RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SP140LQ9H930 580 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 PAK1IP1Q9NWT1 392 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 PTTG3PQ9NZH4 202 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 FZR1Q9UM11 496 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 LRRC42Q9Y546 428 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 TMEM269A0A1B0GVZ9 245 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 J3QW42 95 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 TBX1O43435 398 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 CDK1P06493 297 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR4A8P0C604 315 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ANOS1P23352 680 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 CRHBPP24387 322 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR12D2P58182 307 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ACTA2P62736 377 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ACTG2P63267 376 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF611Q8N823 705 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 SGCDQ92629 289 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ISG20L2Q9H9L3 353 aaKnown RBP12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 ERVK-18Q9QC07 812 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 CRYBG3Q68DQ2 2970 aa12.11□□□□□ -0.47
APOBEC3B-202ENST00000335760 C5orf63A6NC05 138 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 PNPP00491 289 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 TACSTD2P09758 323 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 C21orf33P30042 268 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 SERPINF1P36955 418 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 SLC35A2P78381 396 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 MFGE8Q08431 387 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 MALLQ13021 153 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 MUC15Q8N387 334 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 SYNPRQ8TBG9 265 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 C4orf36Q96KX1 117 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 SYT3Q9BQG1 590 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 DUSP21Q9H596 190 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 ACOXLQ9NUZ1 547 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 CLEC2DQ9UHP7 191 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 DUSP13Q9UII6 198 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 BLOC1S6Q9UL45 172 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 GTF2A1LQ9UNN4 478 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 R4GMQ9 66 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 RAI1Q7Z5J4 1906 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 HRNRQ86YZ3 2850 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 ABCA4P78363 2273 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 DCHS2Q6V1P9 2916 aa12.1□□□□□ -0.47
APOBEC3B-202ENST00000335760 ACOD1A6NK06 481 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 LOC110117498-PIK3R3F6TDL0 507 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 ATE1O95260 518 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF250P15622 560 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 TUBG1P23258 451 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 EEF1B2P24534 225 aaKnown RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 GCH1P30793 250 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 TTKP33981 857 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 MPV17P39210 176 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 PSMB10P40306 273 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 MMP16P51512 607 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 GLYATL3Q5SZD4 288 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 TMPRSS11AQ6ZMR5 421 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 LRP11Q86VZ4 500 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 SYS1Q8N2H4 156 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 KLHL36Q8N4N3 616 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 NRGNQ92686 78 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 RORBQ92753 470 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 CMBLQ96DG6 245 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 SIGLEC11Q96RL6 698 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 PBOV1Q9GZY1 135 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF319Q9P2F9 582 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 CAB39Q9Y376 341 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 SNX5Q9Y5X3 404 aa12.09□□□□□ -0.47
APOBEC3B-202ENST00000335760 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
APOBEC3B-202ENST00000335760 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms