RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ARPC3O15145 178 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 SULT4A1Q9BR01 284 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 WDR54Q9H977 334 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 NDUFB11Q9NX14 153 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 CACNA1IQ9P0X4 2223 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 MEIKINA0A087WXM9 373 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 SULT1B1O43704 296 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF83P51522 516 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 GP2P55259 537 aaKnown RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 FOXL2P58012 376 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 FUT7Q11130 342 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 TOMM34Q15785 309 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 PLXDC2Q6UX71 529 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 OTOSQ8NHW6 89 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 SARGQ9BW04 601 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 SLC25A31Q9H0C2 315 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 GCM1Q9NP62 436 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 FGF20Q9NP95 211 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 FBXO7Q9Y3I1 522 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 FAHP16930 419 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 GALNSP34059 522 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SFRP5Q5T4F7 317 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SLC25A46Q96AG3 418 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 RGCCQ9H4X1 137 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 EXOSC3Q9NQT5 275 aaKnown RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SPTBP11277 2137 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 NPY4RP50391 375 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 PCBP3P57721 371 aaKnown RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 MFGE8Q08431 387 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ACSM1Q08AH1 577 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 CLVS2Q5SYC1 327 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 TFAP2EQ6VUC0 442 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 PRSS35Q8N3Z0 413 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SAP25Q8TEE9 199 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 RHNO1Q9BSD3 238 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 FBXO8Q9NRD0 319 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 CCL27Q9Y4X3 112 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 TDRD6O60522 2096 aaKnown RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SHOXO15266 292 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-201ENST00000334490 TSPAN15O95858 294 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 CASP3P42574 277 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ELP2Q6IA86 826 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 OR10J5Q8NHC4 309 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 FGF11Q92914 225 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ABCA7Q8IZY2 2146 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF92Q03936 586 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 RHEBQ15382 184 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ALKBH6Q3KRA9 238 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 OR4A16Q8NH70 328 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 SEC22AQ96IW7 307 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 OR8B4Q96RC9 309 aa13.48□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF816-ZNF321PA0A0X1KG74 233 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 FUCA1P04066 466 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM52Q8NDY8 209 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 ORAI1Q96D31 301 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 ISYNA1Q9NPH2 558 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM74BQ9NUR3 256 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM100Q9NV29 134 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 SIPA1L1O43166 1804 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 CCL3P10147 92 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 RAC3P60763 192 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 RNLSQ5VYX0 342 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 OR10K2Q6IF99 312 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 MOGAT1Q96PD6 335 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 LYZL6O75951 148 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 GLAP06280 429 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 NFYAP23511 347 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 MAGEA5P43359 124 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 FABP5Q01469 135 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEFF2Q9UIK5 374 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 PCYT1BQ9Y5K3 369 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM235A6NFC5 223 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 RER1O15258 196 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 ETV6P41212 452 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM211Q6ICI0 200 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 TSNAXQ99598 290 aaKnown RBP13.47□□□□□ -0.25
C9orf47-201ENST00000334490 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
C9orf47-201ENST00000334490 HLA-HP01893 362 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 SLC25A1P53007 311 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 SRPXP78539 464 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 TPBGQ13641 420 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 PDLIM3Q53GG5 364 aaPredicted RBP13.46□□□□□ -0.25
C9orf47-201ENST00000334490 STEAP3Q658P3 488 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms