RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 C11orf54Q9H0W9 315 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 DNAJC25-GNG10A0A024R161 153 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CD300LBA8K4G0 201 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4A8P0C604 315 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 HAPLN1P10915 354 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 GOT1P17174 413 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MIIPQ5JXC2 388 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 RTL10Q7L3V2 364 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM234Q8WY98 164 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 KTI12Q96EK9 354 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDX2Q99626 313 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM47Q9BQJ4 181 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PARP12Q9H0J9 701 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLEC5AQ9NY25 188 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TRAV39A0A0B4J263 110 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDX1P47902 265 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MTNR1BP49286 362 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CCR8P51685 355 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 UBE2G1P62253 170 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 NKX3-2P78367 333 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SP2Q02086 613 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C9orf50Q5SZB4 431 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MOGAT3Q86VF5 341 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 GLB1L2Q8IW92 636 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C10orf82Q8WW14 230 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 XAGE5Q8WWM1 108 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 DOK1Q99704 481 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLSCR3Q9NRY6 295 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPCS1Q9Y6A9 102 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR2DS1A0A191URI9 304 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 LYRM9A8MSI8 78 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 NFATC1O95644 943 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR1E2P47887 323 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR2DS1Q14954 304 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM108Q6UXF1 575 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 WDR5BQ86VZ2 330 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PROKR1Q8TCW9 393 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 RNF208Q9H0X6 261 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 LSM7Q9UK45 103 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 F8VP50 259 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 LDLRAD4O15165 306 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 POU3F2P20265 443 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MPGP29372 298 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MAGEA5P43359 124 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C16orf82Q7Z2V1 217 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PXYLP1Q8TE99 480 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 HAS1Q92839 578 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM106AQ96A25 262 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 RHOJQ9H4E5 214 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SAP30LQ9HAJ7 183 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TLR9Q9NR96 1032 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 GSN-AS1Q9NRJ2 163 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 FOXJ3Q9UPW0 622 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CHST2Q9Y4C5 530 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 GBF1Q92538 1859 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SOWAHBA6NEL2 793 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPATA31C2B4DYI2 1134 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 M0R296 226 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATXN7O15265 892 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 HSPB1P04792 205 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACRP10323 421 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CTSL3PQ5NE16 218 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 KDM4DQ6B0I6 523 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF502Q8TBZ5 544 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 PCED1BQ96HM7 432 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAX2Q96IS3 184 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DDOQ99489 341 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 C20orf85Q9H1P6 137 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ADGRL4Q9HBW9 690 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 THSD1Q9NS62 852 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLKB1P03952 638 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 RARRES1P49788 294 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 NPY5RQ15761 445 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FBLN7Q53RD9 439 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM109BQ6ICB4 259 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 LIAT1Q6ZQX7 453 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CTU1Q7Z7A3 348 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CALHM1Q8IU99 346 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ENGASEQ8NFI3 743 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MOB3AQ96BX8 217 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 IFITM10A6NMD0 228 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SCDO00767 359 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 APOMO95445 188 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 NTN1O95631 604 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CATP04040 527 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ORM2P19652 201 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 GRM5P41594 1212 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 NCBP2P52298 156 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 PCBP4P57723 403 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMBIM1Q969X1 311 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DNMT3BQ9UBC3 853 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2A25A4D2G3 310 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 RRHO14718 337 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAMP3O60896 148 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 IFITM1P13164 125 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms