RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMEM269A0A1B0GVZ9 245 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF729A6NN14 1252 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 SMPD1P17405 629 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 SYT14P1Q58G82 188 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 FAM24BQ8N5W8 94 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 OR10J5Q8NHC4 309 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 TMPRSS13Q9BYE2 586 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 ELOVL3Q9HB03 270 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC2A4RGQ9NR83 387 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 OR5V1Q9UGF6 321 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 MCTS1Q9ULC4 181 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 PRAMEF4O60810 478 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 CBR3O75828 277 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 GCSHP23434 173 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 IL3RAP26951 378 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 OR5AU1Q8NGC0 362 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 AMDHD1Q96NU7 426 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 RIMS4Q9H426 269 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 SPATA31A3Q5VYP0 1347 aa9.49□□□□□ -0.89
SPTBN1-201ENST00000333896 UTS2O95399 124 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 ELAVL4P26378 380 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 LTB4RQ15722 352 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 NPY5RQ15761 445 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM128Q5BJH2 165 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MANEAQ5SRI9 462 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 C2orf50Q96LR7 162 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MENTQ9BUN1 341 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 PRAMEF11O60813 436 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 LRP3O75074 770 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 NPY4RP50391 375 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 PCBD1P61457 104 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 CLEC20AQ6ZU45 233 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MBOAT2Q6ZWT7 520 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 KREMEN2Q8NCW0 462 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 OR2A1Q8NGT9 310 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 CPPED1Q9BRF8 314 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 FAM183AA6NL82 134 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 DDAH2O95865 285 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 FUT1P19526 365 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 RAD52P43351 418 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 CLDN12P56749 244 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 OR52D1Q9H346 318 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SOX15O60248 233 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 DOK2O60496 412 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 HEXAP06865 529 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 RTP2Q5QGT7 225 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 NPSR1Q6W5P4 371 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 ANGPTL4Q9BY76 406 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 C5AR2Q9P296 337 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 HS3ST4Q9Y661 456 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SCN7AQ01118 1682 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 RNGTTO60942 597 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 GPR12P47775 334 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MRM1Q6IN84 353 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 OR52I2Q8NH67 350 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 KLHDC7BQ96G42 594 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SHDQ96IW2 340 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 NECTIN4Q96NY8 510 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 M0QYG6 137 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC25A6P12236 298 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 FPGSQ05932 587 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC35E1Q96K37 410 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 DEFB118Q96PH6 123 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 WDR76Q9H967 626 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 GSN-AS1Q9NRJ2 163 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 NXT1Q9UKK6 140 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 PIAS2O75928 621 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 PRF1P14222 555 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 TAS2R45P59539 299 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SMAD2Q15796 467 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 A4GALTQ9NPC4 353 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 CRYABP02511 175 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 LGALS4P56470 323 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC36A2Q495M3 483 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 OR2G6Q5TZ20 316 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 MAVSQ7Z434 540 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 CLEC14AQ86T13 490 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 OPN3Q9H1Y3 402 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
SPTBN1-201ENST00000333896 ROBO1Q9Y6N7 1651 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 A0A087WV62 115 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 TRBV4-1A0A0J9YWV2 114 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZCWPW2A0A1B0GU75 182 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NDUFB6O95139 128 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 COX5AP20674 150 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ERVS71-1P61550 626 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms