RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CGAP01215 116 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 MPGP29372 298 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 PER3P56645 1201 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 ODF4Q2M2E3 257 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 FAM131AQ6UXB0 335 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 SLC16A14Q7RTX9 510 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 MS4A15Q8N5U1 240 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 SLC7A6Q92536 515 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 ABCB9Q9NP78 766 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 PLSCR4Q9NRQ2 329 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 KALRNO60229 2985 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 RTTNQ86VV8 2226 aa20.34■□□□□ 0.85
TSEN54-201ENST00000333213 MEIOCA2RUB1 952 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 DOK2O60496 412 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 GALP22466 123 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 DCTDP32321 178 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 TIMP3P35625 211 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 MMP16P51512 607 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 NKX2-5P52952 324 aaPredicted RBP20.33■□□□□ 0.85
TSEN54-201ENST00000333213 PPP3R1P63098 170 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 PSG4Q00888 419 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 HNRNPA0Q13151 305 aaKnown RBP20.33■□□□□ 0.85
TSEN54-201ENST00000333213 ZFP69Q49AA0 526 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 ELFN2Q5R3F8 820 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 OR10AC1Q8NH08 325 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 OR5AK2Q8NH90 309 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 NEDD4LQ96PU5 975 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 ATF6BQ99941 703 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 PLEK2Q9NYT0 353 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 ZNF281Q9Y2X9 895 aa20.33■□□□□ 0.85
TSEN54-201ENST00000333213 INTS1Q8N201 2190 aaKnown RBP20.33■□□□□ 0.85
TSEN54-201ENST00000333213 RP1L1Q8IWN7 2480 aaPredicted RBP20.33■□□□□ 0.84
TSEN54-201ENST00000333213 FABP12A6NFH5 140 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 CENPXA8MT69 81 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 PRRG2O14669 202 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 GPRIN2O60269 458 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 HLA-DQB1P01920 261 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 IGHV1-2P23083 117 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 CCR9P51686 369 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 PRKXP51817 358 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 ACSM3Q53FZ2 586 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 ZMAT1Q5H9K5 638 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 OR51A4Q8NGJ6 313 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 BRD7Q9NPI1 651 aa20.33■□□□□ 0.84
TSEN54-201ENST00000333213 SYNGR3O43761 229 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 TMIGD3P0DMS9 266 aaPredicted RBP20.32■□□□□ 0.84
TSEN54-201ENST00000333213 GLI4P10075 376 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 TRAM1Q15629 374 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF774Q6NX45 483 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 SYT9Q86SS6 491 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 NAA40Q86UY6 237 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 SLC7A5P1Q8MH63 180 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 OR1K1Q8NGR3 316 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 AKR7LQ8NHP1 331 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 GTF2A1LQ9UNN4 478 aa20.32■□□□□ 0.84
TSEN54-201ENST00000333213 H3BSH0 61 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 FARS2O95363 451 aaKnown RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 DBHP09172 617 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 CSF3P09919 207 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 EDN3P14138 238 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 CFL1P23528 166 aaKnown RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 CTSSP25774 331 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 CEACAM8P31997 349 aaPredicted RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 SDC2P34741 201 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 GALK2Q01415 458 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 YIF1BQ5BJH7 314 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 Q6ZT83 130 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 ABHD12BQ7Z5M8 362 aaPredicted RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 CEACAM19Q7Z692 300 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 ZC3HAV1LQ96H79 300 aaKnown RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 DIRAS2Q96HU8 199 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 OR14A2Q96R54 314 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 OR2H1Q9GZK4 316 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 WNT5BQ9H1J7 359 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 NOX3Q9HBY0 568 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF319Q9P2F9 582 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 OR52A1Q9UKL2 312 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 A0A1W2PPK0 400 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 TMEM212A6NML5 194 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 ERVH48-1M5A8F1 160 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 SGCEO43556 437 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 IL2RAP01589 272 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 HLA-HP01893 362 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 HOXD4P09016 255 aaPredicted RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 SLC2A1P11166 492 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 HSD11B1P28845 292 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 OTX1P32242 354 aaPredicted RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 PSMA6P60900 246 aaKnown RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 SCRN3Q0VDG4 424 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 RIN1Q13671 783 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 TAF13Q15543 124 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 HIKESHIQ53FT3 197 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 PRSS45Q7RTY3 260 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 ZNF610Q8N9Z0 462 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 BCL2L2Q92843 193 aaPredicted RBP20.31■□□□□ 0.84
TSEN54-201ENST00000333213 SOSTQ9BQB4 213 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 TIMM10BQ9Y5J6 103 aa20.31■□□□□ 0.84
TSEN54-201ENST00000333213 E9PLN8 166 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 SFTPCP11686 197 aa20.3■□□□□ 0.84
TSEN54-201ENST00000333213 HLA-DMAP28067 261 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms