RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 DAPL1A0PJW8 107 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 EFCAB10A6NFE3 127 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 FAM20BO75063 409 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 SULT1C4O75897 302 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 LCATP04180 440 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 SLC2A1P11166 492 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 SERPINF1P36955 418 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 RIDAP52758 137 aaKnown RBP13.77□□□□□ -0.21
LRRC28-202ENST00000331450 CSNK2BP67870 215 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 GALEQ14376 348 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 MBNL2Q5VZF2 373 aaKnown RBP13.77□□□□□ -0.21
LRRC28-202ENST00000331450 PLEKHG7Q6ZR37 379 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 FBXL14Q8N1E6 418 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 BPIFB6Q8NFQ5 453 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 KLF14Q8TD94 323 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-202ENST00000331450 Q9H521 79 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 FAM206AQ9NX38 181 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
LRRC28-202ENST00000331450 ARFGEF3Q5TH69 2177 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 ATE1O95260 518 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 KRT8P05787 483 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 CD53P19397 219 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 DCKP27707 260 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 MPV17P39210 176 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 EVX1P49640 407 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 MMP16P51512 607 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 ACTA2P62736 377 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 ACTG2P63267 376 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 MVKQ03426 396 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 MFGE8Q08431 387 aaPredicted RBP13.76□□□□□ -0.21
LRRC28-202ENST00000331450 AGAP6Q5VW22 663 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 FBXW12Q6X9E4 464 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 LRP11Q86VZ4 500 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 OR5L1Q8NGL2 311 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
LRRC28-202ENST00000331450 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 CBLN4Q9NTU7 201 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 PAK1IP1Q9NWT1 392 aaPredicted RBP13.76□□□□□ -0.21
LRRC28-202ENST00000331450 UBAP1Q9NZ09 502 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 PTTG3PQ9NZH4 202 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 ZNF319Q9P2F9 582 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 MYEF2Q9P2K5 600 aaKnown RBP13.76□□□□□ -0.21
LRRC28-202ENST00000331450 FZR1Q9UM11 496 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 ROS1P08922 2347 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 TACC2O95359 2948 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 PDZD2O15018 2839 aa13.76□□□□□ -0.21
LRRC28-202ENST00000331450 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 B9A039 149 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 CLPTM1O96005 669 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 PNPP00491 289 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 IGHV3-13P01766 116 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 RAF1P04049 648 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ETV1P50549 477 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 KLF3P57682 345 aaPredicted RBP13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SLC35A2P78381 396 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ST3GAL4Q11206 333 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ZNF829Q3KNS6 432 aaPredicted RBP13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 TP53I3Q53FA7 332 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 LIPNQ5VXI9 398 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 FAM57BQ71RH2 274 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 LHFPL3Q86UP9 236 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 EGFL6Q8IUX8 553 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SYS1Q8N2H4 156 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 OR52H1Q8NGJ2 320 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SYNPRQ8TBG9 265 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SNX33Q8WV41 574 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SPSB4Q96A44 273 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 TMEM80Q96HE8 168 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SIGLEC11Q96RL6 698 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SYT3Q9BQG1 590 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ALG8Q9BVK2 526 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 SP140LQ9H930 580 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 ACOXLQ9NUZ1 547 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 LAMP3Q9UQV4 416 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 R4GMQ9 66 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 NBPF19A0A087WUL8 3843 aa13.75□□□□□ -0.21
LRRC28-202ENST00000331450 CHD3Q12873 2000 aaKnown RBP13.74□□□□□ -0.21
LRRC28-202ENST00000331450 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 TMEM269A0A1B0GVZ9 245 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 ACOD1A6NK06 481 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 VSTM5A8MXK1 200 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 OVOL3O00110 214 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 XRCC2O43543 280 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 RAC2P15153 192 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 KITLGP21583 273 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 CRHBPP24387 322 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 OR12D2P58182 307 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 PSG7Q13046 419 aa13.74□□□□□ -0.21
LRRC28-202ENST00000331450 GK2Q14410 553 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-202ENST00000331450 HLXQ14774 488 aaPredicted RBP13.74□□□□□ -0.21
LRRC28-202ENST00000331450 KCTD20Q7Z5Y7 419 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms