RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GORASP2Q9H8Y8 452 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 TUBG2Q9NRH3 451 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 ARL8BQ9NVJ2 186 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 PCDHGB1Q9Y5G3 927 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 TVP23AA6NH52 213 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 F5H5K5 113 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 SNX3O60493 162 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 FAM20BO75063 409 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 CD80P33681 288 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 SRP9P49458 86 aaKnown RBP10.32□□□□□ -0.76
TPM3-204ENST00000323144 RAD23AP54725 363 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 MAB21L1Q13394 359 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 LYPD2Q6UXB3 125 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 ZDHHC21Q8IVQ6 265 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 OR52E2Q8NGJ4 325 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 OR9Q1Q8NGQ5 310 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 OR13G1Q8NGZ3 307 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 ZNF582Q96NG8 517 aaPredicted RBP10.32□□□□□ -0.76
TPM3-204ENST00000323144 ADAT1Q9BUB4 502 aaKnown RBP10.32□□□□□ -0.76
TPM3-204ENST00000323144 CDADC1Q9BWV3 514 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 VNN3Q9NY84 501 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 CYB5R1Q9UHQ9 305 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 CDH10Q9Y6N8 788 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 COMMD3-BMI1R4GMX3 469 aa10.32□□□□□ -0.76
TPM3-204ENST00000323144 C22orf46C9J442 243 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 M0R135 149 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 BHLHE40O14503 412 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 WIPF1O43516 503 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 HLA-DQA2P01906 255 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 WNT2P09544 360 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 FPR2P25090 351 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 NOS3P29474 1203 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 PITPNBP48739 271 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 GYS2P54840 703 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 GNB2P62879 340 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 TSPAN31Q12999 210 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 MPPED2Q15777 294 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 SAMD4BQ5PRF9 694 aaKnown RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 CYP2R1Q6VVX0 501 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 MRPL21Q7Z2W9 205 aaKnown RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 OR51L1Q8NGJ5 315 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 OR5L1Q8NGL2 311 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 ZMYND19Q96E35 227 aaPredicted RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 NEIL1Q96FI4 390 aaPredicted RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 ZNF799Q96GE5 643 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 HCAR1Q9BXC0 346 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 NSRP1Q9H0G5 558 aaKnown RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 TMEM165Q9HC07 324 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 DDX28Q9NUL7 540 aaKnown RBP10.31□□□□□ -0.76
TPM3-204ENST00000323144 UFSP2Q9NUQ7 469 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 TMCC3Q9ULS5 477 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 LYVE1Q9Y5Y7 322 aa10.31□□□□□ -0.76
TPM3-204ENST00000323144 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 GMNNO75496 209 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 SOX14O95416 240 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PLATP00750 562 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 LCATP04180 440 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 GYPBP06028 91 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 HKR1P10072 659 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 SLC2A1P11166 492 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PRTN3P24158 256 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 CD200P41217 278 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 GATA4P43694 442 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PAX8Q06710 450 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PPP1R8Q12972 351 aaKnown RBP10.3□□□□□ -0.76
TPM3-204ENST00000323144 BAMBIQ13145 260 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 GLYATL3Q5SZD4 288 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 SLC27A4Q6P1M0 643 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 BRD3OSQ6XYD6 125 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 DEFB107AQ8IZN7 70 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PROKR2Q8NFJ6 384 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 OR8B3Q8NGG8 313 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 OR4C15Q8NGM1 316 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 OR4Q3Q8NH05 313 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 GNPDA2Q8TDQ7 276 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 MCUR1Q96AQ8 359 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 SLCO4A1Q96BD0 722 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 UPRTQ96BW1 309 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 OR8B2Q96RD0 313 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 NTN4Q9HB63 628 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 SMURF1Q9HCE7 757 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 IL1RAPQ9NPH3 570 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 TBC1D23Q9NUY8 699 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 ARMC1Q9NVT9 282 aa10.3□□□□□ -0.76
TPM3-204ENST00000323144 PKD1L1Q8TDX9 2849 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 IFNL4K9M1U5 179 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 FCN3O75636 299 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
TPM3-204ENST00000323144 SPARCP09486 303 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 CLUP10909 449 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 CA6P23280 308 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
TPM3-204ENST00000323144 SMIM11AP58511 58 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 ZNF92Q03936 586 aa10.29□□□□□ -0.76
TPM3-204ENST00000323144 CRMP1Q14194 572 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms