RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LIM2P55344 173 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C21orf58P58505 322 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 KRTDAPP60985 99 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SNRPNP63162 240 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 BAXQ07812 192 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MRPL49Q13405 166 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MAJINQ3KP22 176 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 TRIM61Q5EBN2 209 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 DDA1Q9BW61 102 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MRPS28Q9Y2Q9 187 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 TMED3Q9Y3Q3 217 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CPAMD8Q8IZJ3 1885 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SYNGR4O95473 234 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 HEXAP06865 529 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C8AP07357 584 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 IRF3Q14653 427 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SLCO4C1Q6ZQN7 724 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C19orf35Q6ZS72 473 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 OR8U1Q8NH10 309 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CAPNS2Q96L46 248 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C19orf43Q9BQ61 176 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 NTMQ9P121 344 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 FOXJ3Q9UPW0 622 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 IGLV3-10A0A075B6K4 115 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 A0A1W2PRU2 124 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SCGB2A1O75556 95 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 IGHA2P01877 340 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CD14P08571 375 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 RPL29P47914 159 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CSNK1DP48730 415 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 TESK1Q15569 626 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 PHLDA2Q53GA4 152 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 OR5AR1Q8NGP9 310 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MOB1AQ9H8S9 216 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ZDHHC11Q9H8X9 412 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C19orf25Q9UFG5 118 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 EXOGQ9Y2C4 368 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 Q9Y3F1 56 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 LOC102725191A0A1B0GVB3 256 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 OR3A1P47881 315 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 PNLIPRP3Q17RR3 467 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 PRRT3Q5FWE3 981 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 Q6ZN92 141 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MMABQ96EY8 250 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ABHD6Q9BV23 337 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 BARHL1Q9BZE3 327 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 HIPK2Q9H2X6 1198 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CXCL14O95715 111 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 IGF2P01344 180 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ACTR1AP61163 376 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MEP1BQ16820 701 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SUMF1Q8NBK3 374 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 DTD2Q96FN9 168 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 WFIKKN1Q96NZ8 548 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ULBP3Q9BZM4 244 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C1orf198Q9H425 327 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 AUP1Q9Y679 476 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 F5H5K5 113 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 MAN2B1O00754 1011 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 APBB3O95704 486 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 HBQ1P09105 142 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 OR5I1Q13606 314 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 KCNAB1Q14722 419 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ELAVL1Q15717 326 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF776Q68DI1 518 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SGPP1Q9BX95 441 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 GPR160Q9UJ42 338 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 RPH3ALQ9UNE2 315 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 KCNK7Q9Y2U2 307 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C9orf170A2RU37 121 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 KLF9Q13886 244 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 ARV1Q9H2C2 271 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 PLK3Q9H4B4 646 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 C2CD3Q4AC94 2353 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 PLA2G10O15496 165 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 CLDN1O95832 211 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 HOXB3P14651 431 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 BLVRBP30043 206 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 SLC11A1P49279 550 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 FAM71E1Q6IPT2 247 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 LMNTD1Q8N9Z9 388 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 RASD2Q96D21 266 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 FAM71F1Q96KD3 344 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-201ENST00000322213 TAS2R4Q9NYW5 299 aa6.43□□□□□ -1.38
SMC1A-201ENST00000322213 UPK1AO00322 258 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 GCGP01275 180 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 EDN1P05305 212 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CD200P41217 278 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 TSFMP43897 325 aaKnown RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 FKBP1BP68106 108 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PLCXD3Q63HM9 321 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 DND1Q8IYX4 353 aaKnown RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 APCDD1Q8J025 514 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ARRDC1Q8N5I2 433 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 GCDHQ92947 438 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 MRPS24Q96EL2 167 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms