RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 D2HGDHQ8N465 521 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SMRP1Q8NCR6 262 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PLPP5Q8NEB5 264 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 BPIFCQ8NFQ6 507 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 OR10S1Q8NGN2 331 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 RNF138Q8WVD3 245 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 NUDCD2Q8WVJ2 157 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 FBXW5Q969U6 566 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SLAMF6Q96DU3 332 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PHB2Q99623 299 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 ZNF471Q9BX82 626 aaPredicted RBP7.75□□□□□ -1.17
CLK1-201ENST00000321356 GAREM1Q9H706 876 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 PISDQ9UG56 409 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
CLK1-201ENST00000321356 LAMA1P25391 3075 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 IGHV1OR21-1A0A087WYE8 117 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 A0A1B0GX78 115 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 A0A1W2PNV4 684 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 RHPN2P1A8MT19 583 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 CEACAM18A8MTB9 384 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 F8VVB4 439 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 F8VWA3 439 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 SMAD9O15198 467 aaKnown RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 NUPL2O15504 423 aaKnown RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 ZNF217O75362 1048 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 TSPAN9O75954 239 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 ERCC1P07992 297 aaPredicted RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 FOLR1P15328 257 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 NAT1P18440 290 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 PRKXP51817 358 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 CLDN6P56747 220 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 RNF4P78317 190 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 IL13RA1P78552 427 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 POU3F1Q03052 451 aaPredicted RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 CFHR1Q03591 330 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 TLE3Q04726 772 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 OR7A5Q15622 319 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 INPP5JQ15735 1006 aaPredicted RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 LRRC37A5PQ49AS3 106 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 HOGA1Q86XE5 327 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 OR10R2Q8NGX6 335 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 STOML3Q8TAV4 291 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 C11orf40Q8WZ69 217 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 NKD1Q969G9 470 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 RELTQ969Z4 430 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 C1orf147Q96MC9 270 aaPredicted RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 MRPL13Q9BYD1 178 aaKnown RBP7.74□□□□□ -1.17
CLK1-201ENST00000321356 PBOV1Q9GZY1 135 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 PIGMQ9H3S5 423 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 PTGES2Q9H7Z7 377 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 ZC4H2Q9NQZ6 224 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 CENPMQ9NSP4 180 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 MED29Q9NX70 200 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 TAS2R3Q9NYW6 316 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 MBD2Q9UBB5 411 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 MKL2Q9ULH7 1088 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 KCNK7Q9Y2U2 307 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
CLK1-201ENST00000321356 ASXL3Q9C0F0 2248 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 RAB19A4D1S5 217 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 LIPT2A6NK58 231 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 C2CD4DB7Z1M9 353 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ABCD4O14678 606 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 FGF16O43320 207 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 SYT7O43581 403 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ZNF354AO60765 605 aaPredicted RBP7.73□□□□□ -1.17
CLK1-201ENST00000321356 CRHP06850 196 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ICAM2P13598 275 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 FOSL2P15408 326 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 GNB3P16520 340 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 RAB3AP20336 220 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 AVPR2P30518 371 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 GNALP38405 381 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ARL4DP49703 201 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 OR1D5P58170 312 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 TAS2R31P59538 309 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 C17orf67Q0P5P2 114 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ATXN7L3Q14CW9 347 aaPredicted RBP7.73□□□□□ -1.17
CLK1-201ENST00000321356 RAB30Q15771 203 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ELP2Q6IA86 826 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 RTN4RL2Q86UN3 420 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ESX1Q8N693 406 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 CHST4Q8NCG5 386 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ADAD2Q8NCV1 583 aaKnown RBP7.73□□□□□ -1.17
CLK1-201ENST00000321356 OR5D14Q8NGL3 314 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 THAP6Q8TBB0 222 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 LRRC46Q96FV0 321 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ZC3H10Q96K80 434 aaKnown RBP7.73□□□□□ -1.17
CLK1-201ENST00000321356 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 FOXQ1Q9C009 403 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 LPAR5Q9H1C0 372 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 DUSP15Q9H1R2 295 aaPredicted RBP7.73□□□□□ -1.17
CLK1-201ENST00000321356 IFT46Q9NQC8 304 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 ALKBH4Q9NXW9 302 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 B3GAT1Q9P2W7 334 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 B3GALT5Q9Y2C3 310 aa7.73□□□□□ -1.17
CLK1-201ENST00000321356 LOC100509620A0A075B734 347 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms