RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 LAMB2P55268 1798 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 ADIPOR1Q96A54 375 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 OR5G3P0C626 314 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 PCBP4P57723 403 aaKnown RBP15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 SHHQ15465 462 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 OR2A1Q8NGT9 310 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 PSENENQ9NZ42 101 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 TAPBPO15533 448 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 EDN1P05305 212 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 ETFRF1Q6IPR1 90 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 RHBDD1Q8TEB9 315 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 HDAC8Q9BY41 377 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 RHOFQ9HBH0 211 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 RFC3P40938 356 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 AKR1C3P42330 323 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 GALR1P47211 349 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 DRAM2Q6UX65 266 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 C11orf42Q8N5U0 333 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 C2orf50Q96LR7 162 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 DOCK11Q5JSL3 2073 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 CNN1P51911 297 aaKnown RBP15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 ANKRD16Q6P6B7 361 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 MAML2Q8IZL2 1156 aaPredicted RBP15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 OR6C1Q96RD1 312 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 RNF167Q9H6Y7 350 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 ARFGEF1Q9Y6D6 1849 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 FITM1A5D6W6 292 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 HIST1H1CP16403 213 aaKnown RBP15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 TMEM268Q5VZI3 342 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 FA2HQ7L5A8 372 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 EXD3Q8N9H8 876 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 ACER3Q9NUN7 267 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 CST2P09228 141 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 STAG3L2P0CL84 134 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 TMEM40Q8WWA1 233 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 CCDC74AQ96AQ1 378 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 HCFC1R1Q9NWW0 138 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 LIMS3P0CW19 117 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 LIMS4P0CW20 117 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 CEBPEQ15744 281 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 TAAR6Q96RI8 345 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 SLC17A4Q9Y2C5 497 aa15.39■□□□□ 0.05
SMCHD1-201ENST00000320876 COX7A2P2O60397 106 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ARRB2P32121 409 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 LKAAEAR1Q8TD35 194 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 S1PR3Q99500 378 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 OBP2AQ9NY56 170 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 USP3Q9Y6I4 520 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 A0A087WV62 115 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 TLCD2A6NGC4 264 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ZFPM2Q8WW38 1151 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ZNF775Q96BV0 537 aaPredicted RBP15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 UBE2L5PA0A1B0GUS4 154 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ARR3P36575 388 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 RPS23P62266 143 aaKnown RBP15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ACKR1Q16570 336 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 BHLHE23Q8NDY6 225 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ERGIC1Q969X5 290 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 COA3Q9Y2R0 106 aaPredicted RBP15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 PFN3P60673 137 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 DHRS11Q6UWP2 260 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 DLEU7Q6UYE1 221 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 CMC2Q9NRP2 79 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 NRASP01111 189 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 TEX37Q96LM6 180 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 LRRC3CA6NJW4 275 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ZNF429Q86V71 674 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 TMEM178AQ8NBL3 297 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 AGBL5Q8NDL9 886 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 CYB5R1Q9UHQ9 305 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 DUSP13Q9UII6 198 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 HMGN4O00479 90 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 EIF4E2O60573 245 aaKnown RBP15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 HSBP1O75506 76 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 OR2J3O76001 311 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 LIM2P55344 173 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 TIMD4Q96H15 378 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 DUSP22Q9NRW4 184 aa15.38■□□□□ 0.05
SMCHD1-201ENST00000320876 ZAR1LA6NP61 321 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 PLRG1O43660 514 aaKnown RBP15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 ABI3BPQ7Z7G0 1075 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 HLA-CQ95604 372 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 DUS3LQ96G46 650 aaKnown RBP15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 INSM2Q96T92 566 aaPredicted RBP15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 ZDHHC5Q9C0B5 715 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 COMMD5Q9GZQ3 224 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 WDR61Q9GZS3 305 aaKnown RBP15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 OR2M5A3KFT3 312 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 KLRC4-KLRK1H3BQV0 150 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 NQO2P16083 231 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 PRR27Q6MZM9 219 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 VWA1Q6PCB0 445 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 AKIP1Q9NQ31 210 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 TIMM9Q9Y5J7 89 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 TBXA2RP21731 343 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 XKR7Q5GH72 579 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 CMTM4Q8IZR5 234 aa15.37■□□□□ 0.05
SMCHD1-201ENST00000320876 UBE2FQ969M7 185 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms